Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPRP12270 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPRP12270 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPRP12270 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TPRP12270 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.39■□□□□ 0.37
TPRP12270 AL513190.1-201ENST00000621254 727 ntBASIC17.39■□□□□ 0.37
TPRP12270 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TPRP12270 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPRP12270 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.39■□□□□ 0.37
TPRP12270 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPRP12270 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.39■□□□□ 0.37
TPRP12270 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
TPRP12270 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TPRP12270 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TPRP12270 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPRP12270 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.39■□□□□ 0.37
TPRP12270 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.39■□□□□ 0.37
TPRP12270 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPRP12270 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRP12270 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.38■□□□□ 0.37
TPRP12270 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TPRP12270 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRP12270 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRP12270 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.38■□□□□ 0.37
TPRP12270 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
TPRP12270 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.38■□□□□ 0.37
TPRP12270 MIR3180-5-201ENST00000583743 153 ntBASIC17.38■□□□□ 0.37
TPRP12270 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRP12270 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.38■□□□□ 0.37
TPRP12270 DPP3P2-201ENST00000416030 1696 ntBASIC17.38■□□□□ 0.37
TPRP12270 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPRP12270 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TPRP12270 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRP12270 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TPRP12270 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.38■□□□□ 0.37
TPRP12270 MKNK2P1-201ENST00000437526 628 ntBASIC17.38■□□□□ 0.37
TPRP12270 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.38■□□□□ 0.37
TPRP12270 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.38■□□□□ 0.37
TPRP12270 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.38■□□□□ 0.37
TPRP12270 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.38■□□□□ 0.37
TPRP12270 AC025062.2-201ENST00000605477 670 ntBASIC17.38■□□□□ 0.37
TPRP12270 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRP12270 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.38■□□□□ 0.37
TPRP12270 FBXW4P1-201ENST00000426721 2239 ntBASIC17.37■□□□□ 0.37
TPRP12270 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPRP12270 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPRP12270 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.37■□□□□ 0.37
TPRP12270 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPRP12270 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPRP12270 ELL2P1-201ENST00000413990 1906 ntBASIC17.37■□□□□ 0.37
TPRP12270 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TPRP12270 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.37■□□□□ 0.37
TPRP12270 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.37■□□□□ 0.37
TPRP12270 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.37■□□□□ 0.37
TPRP12270 AC024563.2-201ENST00000603282 481 ntBASIC17.37■□□□□ 0.37
TPRP12270 MIR6799-201ENST00000620297 69 ntBASIC17.37■□□□□ 0.37
TPRP12270 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPRP12270 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPRP12270 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.37■□□□□ 0.37
TPRP12270 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TPRP12270 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.37■□□□□ 0.37
TPRP12270 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPRP12270 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPRP12270 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPRP12270 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPRP12270 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.37■□□□□ 0.37
TPRP12270 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.37■□□□□ 0.37
TPRP12270 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.37■□□□□ 0.37
TPRP12270 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPRP12270 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPRP12270 CR383656.12-201ENST00000549567 513 ntBASIC17.37■□□□□ 0.37
TPRP12270 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPRP12270 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TPRP12270 SMG8-203ENST00000578922 2178 ntBASIC17.37■□□□□ 0.37
TPRP12270 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPRP12270 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.36■□□□□ 0.37
TPRP12270 HEIH-201ENST00000623091 1652 ntBASIC17.36■□□□□ 0.37
TPRP12270 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TPRP12270 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 FP700111.2-201ENST00000619190 1892 ntBASIC17.36■□□□□ 0.37
TPRP12270 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.36■□□□□ 0.37
TPRP12270 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.36■□□□□ 0.37
TPRP12270 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.36■□□□□ 0.37
TPRP12270 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TPRP12270 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.36■□□□□ 0.37
TPRP12270 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TPRP12270 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.36■□□□□ 0.37
TPRP12270 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPRP12270 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms