Protein–RNA interactions for Protein: P11586

MTHFD1, C-1-tetrahydrofolate synthase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1P11586 KRT8P45-201ENST00000414328 1447 ntBASIC18.38■□□□□ 0.53
MTHFD1P11586 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MTHFD1P11586 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MTHFD1P11586 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MTHFD1P11586 GPAT2P1-201ENST00000444924 1672 ntBASIC18.38■□□□□ 0.53
MTHFD1P11586 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.37■□□□□ 0.53
MTHFD1P11586 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.37■□□□□ 0.53
MTHFD1P11586 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MTHFD1P11586 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.37■□□□□ 0.53
MTHFD1P11586 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.37■□□□□ 0.53
MTHFD1P11586 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.37■□□□□ 0.53
MTHFD1P11586 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.37■□□□□ 0.53
MTHFD1P11586 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.37■□□□□ 0.53
MTHFD1P11586 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.37■□□□□ 0.53
MTHFD1P11586 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
MTHFD1P11586 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.37■□□□□ 0.53
MTHFD1P11586 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.37■□□□□ 0.53
MTHFD1P11586 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MTHFD1P11586 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
MTHFD1P11586 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MTHFD1P11586 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFD1P11586 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFD1P11586 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFD1P11586 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFD1P11586 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
MTHFD1P11586 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFD1P11586 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
MTHFD1P11586 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFD1P11586 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
MTHFD1P11586 AL023284.2-201ENST00000405850 579 ntBASIC18.36■□□□□ 0.53
MTHFD1P11586 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.36■□□□□ 0.53
MTHFD1P11586 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFD1P11586 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
MTHFD1P11586 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFD1P11586 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.36■□□□□ 0.53
MTHFD1P11586 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFD1P11586 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.36■□□□□ 0.53
MTHFD1P11586 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
MTHFD1P11586 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.36■□□□□ 0.53
MTHFD1P11586 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFD1P11586 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFD1P11586 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.36■□□□□ 0.53
MTHFD1P11586 AC141257.4-201ENST00000634557 245 ntBASIC18.36■□□□□ 0.53
MTHFD1P11586 AC136944.6-201ENST00000634818 245 ntBASIC18.36■□□□□ 0.53
MTHFD1P11586 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MTHFD1P11586 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.35■□□□□ 0.53
MTHFD1P11586 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFD1P11586 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFD1P11586 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFD1P11586 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFD1P11586 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFD1P11586 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFD1P11586 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFD1P11586 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.35■□□□□ 0.53
MTHFD1P11586 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.35■□□□□ 0.53
MTHFD1P11586 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MTHFD1P11586 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFD1P11586 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFD1P11586 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFD1P11586 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFD1P11586 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFD1P11586 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.35■□□□□ 0.53
MTHFD1P11586 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFD1P11586 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFD1P11586 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.35■□□□□ 0.53
MTHFD1P11586 BX664615.1-201ENST00000443558 458 ntBASIC18.35■□□□□ 0.53
MTHFD1P11586 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MTHFD1P11586 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.35■□□□□ 0.53
MTHFD1P11586 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
MTHFD1P11586 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.35■□□□□ 0.53
MTHFD1P11586 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.35■□□□□ 0.53
MTHFD1P11586 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.35■□□□□ 0.53
MTHFD1P11586 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFD1P11586 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MTHFD1P11586 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFD1P11586 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFD1P11586 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.34■□□□□ 0.53
MTHFD1P11586 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
MTHFD1P11586 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.34■□□□□ 0.53
MTHFD1P11586 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MTHFD1P11586 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms