Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
CALM3P0DP25 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CALM3P0DP25 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CALM3P0DP25 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.57■■□□□ 1.04
CALM3P0DP25 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.57■■□□□ 1.04
CALM3P0DP25 AK4P3-201ENST00000418260 669 ntBASIC21.57■■□□□ 1.04
CALM3P0DP25 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.57■■□□□ 1.04
CALM3P0DP25 AC104076.2-201ENST00000448912 469 ntBASIC21.57■■□□□ 1.04
CALM3P0DP25 AC034232.1-201ENST00000506026 1064 ntBASIC21.57■■□□□ 1.04
CALM3P0DP25 MIR3917-201ENST00000580971 93 ntBASIC21.57■■□□□ 1.04
CALM3P0DP25 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CALM3P0DP25 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CALM3P0DP25 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CALM3P0DP25 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CALM3P0DP25 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.56■■□□□ 1.04
CALM3P0DP25 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CALM3P0DP25 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.56■■□□□ 1.04
CALM3P0DP25 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.56■■□□□ 1.04
CALM3P0DP25 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.56■■□□□ 1.04
CALM3P0DP25 TSPY5P-201ENST00000426936 936 ntBASIC21.56■■□□□ 1.04
CALM3P0DP25 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CALM3P0DP25 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.56■■□□□ 1.04
CALM3P0DP25 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CALM3P0DP25 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.56■■□□□ 1.04
CALM3P0DP25 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
CALM3P0DP25 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CALM3P0DP25 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.56■■□□□ 1.04
CALM3P0DP25 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CALM3P0DP25 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.56■■□□□ 1.04
CALM3P0DP25 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CALM3P0DP25 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CALM3P0DP25 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.55■■□□□ 1.04
CALM3P0DP25 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CALM3P0DP25 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CALM3P0DP25 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
CALM3P0DP25 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CALM3P0DP25 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CALM3P0DP25 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CALM3P0DP25 MIR149-201ENST00000384879 89 ntBASIC21.55■■□□□ 1.04
CALM3P0DP25 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CALM3P0DP25 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.55■■□□□ 1.04
CALM3P0DP25 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.55■■□□□ 1.04
CALM3P0DP25 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.55■■□□□ 1.04
CALM3P0DP25 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.55■■□□□ 1.04
CALM3P0DP25 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
CALM3P0DP25 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.55■■□□□ 1.04
CALM3P0DP25 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.55■■□□□ 1.04
CALM3P0DP25 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CALM3P0DP25 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.55■■□□□ 1.04
CALM3P0DP25 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CALM3P0DP25 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CALM3P0DP25 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.55■■□□□ 1.04
CALM3P0DP25 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
CALM3P0DP25 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CALM3P0DP25 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CALM3P0DP25 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CALM3P0DP25 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.55■■□□□ 1.04
CALM3P0DP25 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CALM3P0DP25 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CALM3P0DP25 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CALM3P0DP25 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CALM3P0DP25 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CALM3P0DP25 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CALM3P0DP25 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CALM3P0DP25 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CALM3P0DP25 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CALM3P0DP25 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CALM3P0DP25 HOMER2P1-201ENST00000455653 964 ntBASIC21.54■■□□□ 1.04
CALM3P0DP25 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CALM3P0DP25 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CALM3P0DP25 AC126763.1-201ENST00000552015 2118 ntBASIC21.54■■□□□ 1.04
CALM3P0DP25 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CALM3P0DP25 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.54■■□□□ 1.04
CALM3P0DP25 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CALM3P0DP25 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CALM3P0DP25 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CALM3P0DP25 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CALM3P0DP25 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CALM3P0DP25 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CALM3P0DP25 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CALM3P0DP25 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CALM3P0DP25 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.54■■□□□ 1.04
CALM3P0DP25 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CALM3P0DP25 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
CALM3P0DP25 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CALM3P0DP25 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CALM3P0DP25 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.53■■□□□ 1.04
CALM3P0DP25 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CALM3P0DP25 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CALM3P0DP25 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CALM3P0DP25 STARP1-201ENST00000397973 869 ntBASIC21.53■■□□□ 1.04
CALM3P0DP25 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CALM3P0DP25 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.53■■□□□ 1.04
CALM3P0DP25 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.53■■□□□ 1.04
CALM3P0DP25 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.53■■□□□ 1.04
CALM3P0DP25 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.53■■□□□ 1.04
CALM3P0DP25 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CALM3P0DP25 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CALM3P0DP25 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CALM3P0DP25 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms