Protein–RNA interactions for Protein: P0CG01

GKN3P, Gastrokine-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKN3PP0CG01 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
GKN3PP0CG01 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.15■□□□□ 0.34
GKN3PP0CG01 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
GKN3PP0CG01 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GKN3PP0CG01 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GKN3PP0CG01 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.15■□□□□ 0.34
GKN3PP0CG01 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.15■□□□□ 0.34
GKN3PP0CG01 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
GKN3PP0CG01 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GKN3PP0CG01 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.15■□□□□ 0.34
GKN3PP0CG01 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GKN3PP0CG01 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.15■□□□□ 0.34
GKN3PP0CG01 AC026471.1-201ENST00000564629 3026 ntBASIC17.15■□□□□ 0.34
GKN3PP0CG01 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GKN3PP0CG01 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.15■□□□□ 0.34
GKN3PP0CG01 AC073592.3-201ENST00000625118 1834 ntBASIC17.14■□□□□ 0.34
GKN3PP0CG01 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GKN3PP0CG01 AL390961.4-201ENST00000623958 2535 ntBASIC17.14■□□□□ 0.33
GKN3PP0CG01 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GKN3PP0CG01 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GKN3PP0CG01 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GKN3PP0CG01 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.14■□□□□ 0.33
GKN3PP0CG01 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GKN3PP0CG01 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GKN3PP0CG01 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GKN3PP0CG01 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GKN3PP0CG01 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.14■□□□□ 0.33
GKN3PP0CG01 TSPY7P-201ENST00000431358 1114 ntBASIC17.14■□□□□ 0.33
GKN3PP0CG01 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.14■□□□□ 0.33
GKN3PP0CG01 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
GKN3PP0CG01 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.14■□□□□ 0.33
GKN3PP0CG01 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.14■□□□□ 0.33
GKN3PP0CG01 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.14■□□□□ 0.33
GKN3PP0CG01 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.14■□□□□ 0.33
GKN3PP0CG01 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.14■□□□□ 0.33
GKN3PP0CG01 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.14■□□□□ 0.33
GKN3PP0CG01 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.14■□□□□ 0.33
GKN3PP0CG01 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GKN3PP0CG01 BICD1-207ENST00000551848 1962 ntBASIC17.14■□□□□ 0.33
GKN3PP0CG01 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GKN3PP0CG01 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GKN3PP0CG01 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
GKN3PP0CG01 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GKN3PP0CG01 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GKN3PP0CG01 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GKN3PP0CG01 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GKN3PP0CG01 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GKN3PP0CG01 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GKN3PP0CG01 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
GKN3PP0CG01 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GKN3PP0CG01 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GKN3PP0CG01 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GKN3PP0CG01 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GKN3PP0CG01 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.13■□□□□ 0.33
GKN3PP0CG01 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
GKN3PP0CG01 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.13■□□□□ 0.33
GKN3PP0CG01 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
GKN3PP0CG01 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GKN3PP0CG01 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.13■□□□□ 0.33
GKN3PP0CG01 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
GKN3PP0CG01 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.13■□□□□ 0.33
GKN3PP0CG01 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.13■□□□□ 0.33
GKN3PP0CG01 AP003071.4-201ENST00000562276 1284 ntBASIC17.13■□□□□ 0.33
GKN3PP0CG01 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.13■□□□□ 0.33
GKN3PP0CG01 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
GKN3PP0CG01 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
GKN3PP0CG01 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.13■□□□□ 0.33
GKN3PP0CG01 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GKN3PP0CG01 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
GKN3PP0CG01 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GKN3PP0CG01 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.12■□□□□ 0.33
GKN3PP0CG01 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GKN3PP0CG01 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.12■□□□□ 0.33
GKN3PP0CG01 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GKN3PP0CG01 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
GKN3PP0CG01 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GKN3PP0CG01 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GKN3PP0CG01 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GKN3PP0CG01 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms