Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 FP475955.4-201ENST00000623131 1990 ntBASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 IRX1P1-201ENST00000438849 1838 ntBASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 AL162741.1-201ENST00000565563 1558 ntBASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 AC010240.3-201ENST00000607688 395 ntBASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40ALP0C0E4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 AC141586.3-201ENST00000562166 1838 ntBASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 KRT8P26-201ENST00000534154 1276 ntBASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 AC034236.2-201ENST00000606662 1610 ntBASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 AC016734.2-201ENST00000624325 1377 ntBASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40ALP0C0E4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 AC004408.2-201ENST00000623613 2777 ntBASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 AC092329.2-201ENST00000598402 547 ntBASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 AC092119.3-201ENST00000612618 583 ntBASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40ALP0C0E4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms