Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC067852.2-201ENST00000590513 2313 ntBASIC20.49■□□□□ 0.87
TPM1P09493 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TPM1P09493 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TPM1P09493 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TPM1P09493 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.49■□□□□ 0.87
TPM1P09493 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TPM1P09493 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TPM1P09493 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TPM1P09493 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM1P09493 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.48■□□□□ 0.87
TPM1P09493 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM1P09493 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM1P09493 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
TPM1P09493 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.48■□□□□ 0.87
TPM1P09493 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM1P09493 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.48■□□□□ 0.87
TPM1P09493 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.48■□□□□ 0.87
TPM1P09493 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TPM1P09493 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.48■□□□□ 0.87
TPM1P09493 CROCCP1-201ENST00000426910 5675 ntBASIC20.48■□□□□ 0.87
TPM1P09493 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TPM1P09493 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TPM1P09493 TSPY6P-201ENST00000448518 926 ntBASIC20.48■□□□□ 0.87
TPM1P09493 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM1P09493 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TPM1P09493 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.48■□□□□ 0.87
TPM1P09493 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.48■□□□□ 0.87
TPM1P09493 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TPM1P09493 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM1P09493 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM1P09493 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TPM1P09493 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM1P09493 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM1P09493 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
TPM1P09493 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TPM1P09493 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TPM1P09493 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TPM1P09493 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TPM1P09493 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TPM1P09493 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TPM1P09493 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.47■□□□□ 0.87
TPM1P09493 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.47■□□□□ 0.87
TPM1P09493 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
TPM1P09493 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TPM1P09493 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TPM1P09493 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TPM1P09493 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TPM1P09493 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.47■□□□□ 0.87
TPM1P09493 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.47■□□□□ 0.87
TPM1P09493 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.47■□□□□ 0.87
TPM1P09493 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.47■□□□□ 0.87
TPM1P09493 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TPM1P09493 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TPM1P09493 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TPM1P09493 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TPM1P09493 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TPM1P09493 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM1P09493 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM1P09493 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM1P09493 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM1P09493 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TPM1P09493 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
TPM1P09493 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TPM1P09493 NBPF21P-201ENST00000425093 1451 ntBASIC20.46■□□□□ 0.87
TPM1P09493 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM1P09493 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM1P09493 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.46■□□□□ 0.87
TPM1P09493 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.46■□□□□ 0.87
TPM1P09493 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.46■□□□□ 0.87
TPM1P09493 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM1P09493 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.46■□□□□ 0.87
TPM1P09493 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.46■□□□□ 0.87
TPM1P09493 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM1P09493 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM1P09493 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TPM1P09493 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM1P09493 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TPM1P09493 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM1P09493 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM1P09493 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TPM1P09493 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
TPM1P09493 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
TPM1P09493 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
TPM1P09493 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM1P09493 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM1P09493 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TPM1P09493 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TPM1P09493 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.45■□□□□ 0.86
TPM1P09493 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.45■□□□□ 0.86
TPM1P09493 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.45■□□□□ 0.86
TPM1P09493 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM1P09493 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TPM1P09493 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM1P09493 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TPM1P09493 GUSBP6-202ENST00000438529 1198 ntBASIC20.45■□□□□ 0.86
TPM1P09493 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.45■□□□□ 0.86
TPM1P09493 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TPM1P09493 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TPM1P09493 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.45■□□□□ 0.86
TPM1P09493 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms