Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHOP08100 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.24■□□□□ 0.67
RHOP08100 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RHOP08100 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHOP08100 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RHOP08100 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHOP08100 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHOP08100 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RHOP08100 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.24■□□□□ 0.67
RHOP08100 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RHOP08100 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.23■□□□□ 0.67
RHOP08100 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHOP08100 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.23■□□□□ 0.67
RHOP08100 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHOP08100 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
RHOP08100 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.23■□□□□ 0.67
RHOP08100 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RHOP08100 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RHOP08100 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
RHOP08100 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
RHOP08100 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.23■□□□□ 0.67
RHOP08100 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
RHOP08100 VENTXP7-201ENST00000475503 772 ntBASIC19.23■□□□□ 0.67
RHOP08100 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.23■□□□□ 0.67
RHOP08100 AP002469.2-201ENST00000531724 424 ntBASIC19.23■□□□□ 0.67
RHOP08100 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHOP08100 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.23■□□□□ 0.67
RHOP08100 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.23■□□□□ 0.67
RHOP08100 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.23■□□□□ 0.67
RHOP08100 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.23■□□□□ 0.67
RHOP08100 MTMR9LP-203ENST00000426597 1545 ntBASIC19.23■□□□□ 0.67
RHOP08100 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.23■□□□□ 0.67
RHOP08100 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RHOP08100 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.23■□□□□ 0.67
RHOP08100 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RHOP08100 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RHOP08100 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHOP08100 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RHOP08100 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.22■□□□□ 0.67
RHOP08100 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RHOP08100 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RHOP08100 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RHOP08100 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHOP08100 NSUN5P1-202ENST00000421140 1535 ntBASIC19.22■□□□□ 0.67
RHOP08100 NSUN5P2-203ENST00000457352 1529 ntBASIC19.22■□□□□ 0.67
RHOP08100 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHOP08100 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHOP08100 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RHOP08100 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RHOP08100 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHOP08100 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHOP08100 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RHOP08100 KRT16P4-201ENST00000453883 522 ntBASIC19.22■□□□□ 0.67
RHOP08100 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RHOP08100 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.22■□□□□ 0.67
RHOP08100 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RHOP08100 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.22■□□□□ 0.67
RHOP08100 AP005901.3-202ENST00000581653 237 ntBASIC19.22■□□□□ 0.67
RHOP08100 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RHOP08100 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.22■□□□□ 0.67
RHOP08100 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
RHOP08100 AC007952.6-201ENST00000573168 2673 ntBASIC19.22■□□□□ 0.67
RHOP08100 AC003957.1-201ENST00000625108 2673 ntBASIC19.22■□□□□ 0.67
RHOP08100 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RHOP08100 AC093484.2-201ENST00000580996 2166 ntBASIC19.22■□□□□ 0.67
RHOP08100 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHOP08100 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RHOP08100 AL163051.1-201ENST00000569214 1512 ntBASIC19.21■□□□□ 0.67
RHOP08100 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RHOP08100 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.21■□□□□ 0.67
RHOP08100 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RHOP08100 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.21■□□□□ 0.67
RHOP08100 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHOP08100 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHOP08100 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.21■□□□□ 0.67
RHOP08100 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.21■□□□□ 0.67
RHOP08100 AC091607.1-201ENST00000490318 1060 ntBASIC19.21■□□□□ 0.67
RHOP08100 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.21■□□□□ 0.67
RHOP08100 KRT18P41-201ENST00000518924 1277 ntBASIC19.21■□□□□ 0.67
RHOP08100 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.21■□□□□ 0.67
RHOP08100 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.21■□□□□ 0.67
RHOP08100 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.21■□□□□ 0.67
RHOP08100 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.21■□□□□ 0.67
RHOP08100 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.21■□□□□ 0.67
RHOP08100 AL121912.1-201ENST00000603683 238 ntBASIC19.21■□□□□ 0.67
RHOP08100 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RHOP08100 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.21■□□□□ 0.67
RHOP08100 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.21■□□□□ 0.67
RHOP08100 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RHOP08100 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHOP08100 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.21■□□□□ 0.67
RHOP08100 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHOP08100 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RHOP08100 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHOP08100 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHOP08100 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RHOP08100 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHOP08100 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.2■□□□□ 0.66
RHOP08100 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHOP08100 AFG3L1P-217ENST00000557444 2447 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms