Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CTSDP07339 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CTSDP07339 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CTSDP07339 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CTSDP07339 KRT8P41-201ENST00000533985 1514 ntBASIC15.44■□□□□ 0.06
CTSDP07339 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.44■□□□□ 0.06
CTSDP07339 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CTSDP07339 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.44■□□□□ 0.06
CTSDP07339 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.44■□□□□ 0.06
CTSDP07339 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.44■□□□□ 0.06
CTSDP07339 CROCCP5-201ENST00000436658 830 ntBASIC15.44■□□□□ 0.06
CTSDP07339 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.44■□□□□ 0.06
CTSDP07339 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.44■□□□□ 0.06
CTSDP07339 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CTSDP07339 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.44■□□□□ 0.06
CTSDP07339 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.44■□□□□ 0.06
CTSDP07339 AL050303.2-201ENST00000619798 666 ntBASIC15.44■□□□□ 0.06
CTSDP07339 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CTSDP07339 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CTSDP07339 REXO1L9P-201ENST00000604264 2108 ntBASIC15.44■□□□□ 0.06
CTSDP07339 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CTSDP07339 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CTSDP07339 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CTSDP07339 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CTSDP07339 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CTSDP07339 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
CTSDP07339 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CTSDP07339 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CTSDP07339 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CTSDP07339 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 AC012317.2-201ENST00000623305 2251 ntBASIC15.43■□□□□ 0.06
CTSDP07339 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.43■□□□□ 0.06
CTSDP07339 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CTSDP07339 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 AL357033.4-201ENST00000617703 1807 ntBASIC15.43■□□□□ 0.06
CTSDP07339 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CTSDP07339 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.43■□□□□ 0.06
CTSDP07339 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.43■□□□□ 0.06
CTSDP07339 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.43■□□□□ 0.06
CTSDP07339 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.43■□□□□ 0.06
CTSDP07339 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.43■□□□□ 0.06
CTSDP07339 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.43■□□□□ 0.06
CTSDP07339 PNMA6B-201ENST00000538162 1200 ntBASIC15.43■□□□□ 0.06
CTSDP07339 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.43■□□□□ 0.06
CTSDP07339 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.43■□□□□ 0.06
CTSDP07339 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.43■□□□□ 0.06
CTSDP07339 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.43■□□□□ 0.06
CTSDP07339 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.43■□□□□ 0.06
CTSDP07339 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CTSDP07339 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CTSDP07339 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CTSDP07339 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
CTSDP07339 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.42■□□□□ 0.06
CTSDP07339 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CTSDP07339 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTSDP07339 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.42■□□□□ 0.06
CTSDP07339 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
CTSDP07339 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSDP07339 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTSDP07339 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CTSDP07339 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.42■□□□□ 0.06
CTSDP07339 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.42■□□□□ 0.06
CTSDP07339 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.42■□□□□ 0.06
CTSDP07339 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.42■□□□□ 0.06
CTSDP07339 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.42■□□□□ 0.06
CTSDP07339 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.42■□□□□ 0.06
CTSDP07339 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.42■□□□□ 0.06
CTSDP07339 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.42■□□□□ 0.06
CTSDP07339 C1QL1P1-201ENST00000568105 661 ntBASIC15.42■□□□□ 0.06
CTSDP07339 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSDP07339 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTSDP07339 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTSDP07339 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSDP07339 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTSDP07339 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSDP07339 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CTSDP07339 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSDP07339 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
CTSDP07339 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CTSDP07339 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSDP07339 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSDP07339 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CTSDP07339 KRT8P3-201ENST00000519669 1449 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms