Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 AP000593.1-201ENST00000393668 712 ntBASIC18.84■□□□□ 0.61
HLA-DQB2P05538 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.84■□□□□ 0.61
HLA-DQB2P05538 NEFHP1-201ENST00000412845 2629 ntBASIC18.84■□□□□ 0.61
HLA-DQB2P05538 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 AC099343.3-201ENST00000605834 2503 ntBASIC18.83■□□□□ 0.61
HLA-DQB2P05538 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DQB2P05538 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
HLA-DQB2P05538 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DQB2P05538 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DQB2P05538 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 AL512604.3-201ENST00000569583 964 ntBASIC18.83■□□□□ 0.6
HLA-DQB2P05538 AL138966.2-201ENST00000621997 464 ntBASIC18.83■□□□□ 0.6
HLA-DQB2P05538 AC112497.1-201ENST00000624824 639 ntBASIC18.83■□□□□ 0.6
HLA-DQB2P05538 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.83■□□□□ 0.6
HLA-DQB2P05538 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 AC113347.1-201ENST00000413321 391 ntBASIC18.82■□□□□ 0.6
HLA-DQB2P05538 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 AC141257.4-201ENST00000634557 245 ntBASIC18.82■□□□□ 0.6
HLA-DQB2P05538 AC136944.6-201ENST00000634818 245 ntBASIC18.82■□□□□ 0.6
HLA-DQB2P05538 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 KRT8P7-201ENST00000533003 1432 ntBASIC18.82■□□□□ 0.6
HLA-DQB2P05538 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DQB2P05538 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DQB2P05538 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms