Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.58■□□□□ 0.72
SOD2P04179 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.58■□□□□ 0.72
SOD2P04179 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
SOD2P04179 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SOD2P04179 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SOD2P04179 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SOD2P04179 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SOD2P04179 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SOD2P04179 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SOD2P04179 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
SOD2P04179 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SOD2P04179 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.58■□□□□ 0.72
SOD2P04179 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SOD2P04179 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
SOD2P04179 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SOD2P04179 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SOD2P04179 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SOD2P04179 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SOD2P04179 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SOD2P04179 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SOD2P04179 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.57■□□□□ 0.72
SOD2P04179 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SOD2P04179 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SOD2P04179 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.57■□□□□ 0.72
SOD2P04179 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SOD2P04179 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.57■□□□□ 0.72
SOD2P04179 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.57■□□□□ 0.72
SOD2P04179 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.57■□□□□ 0.72
SOD2P04179 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SOD2P04179 AP005901.3-202ENST00000581653 237 ntBASIC19.57■□□□□ 0.72
SOD2P04179 AL353801.3-201ENST00000609898 542 ntBASIC19.57■□□□□ 0.72
SOD2P04179 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.57■□□□□ 0.72
SOD2P04179 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SOD2P04179 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SOD2P04179 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SOD2P04179 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.57■□□□□ 0.72
SOD2P04179 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SOD2P04179 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.57■□□□□ 0.72
SOD2P04179 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.56■□□□□ 0.72
SOD2P04179 NSUN5P1-202ENST00000421140 1535 ntBASIC19.56■□□□□ 0.72
SOD2P04179 NSUN5P2-203ENST00000457352 1529 ntBASIC19.56■□□□□ 0.72
SOD2P04179 AC007952.6-201ENST00000573168 2673 ntBASIC19.56■□□□□ 0.72
SOD2P04179 AC003957.1-201ENST00000625108 2673 ntBASIC19.56■□□□□ 0.72
SOD2P04179 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SOD2P04179 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SOD2P04179 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SOD2P04179 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SOD2P04179 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.56■□□□□ 0.72
SOD2P04179 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.56■□□□□ 0.72
SOD2P04179 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SOD2P04179 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.56■□□□□ 0.72
SOD2P04179 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.56■□□□□ 0.72
SOD2P04179 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.56■□□□□ 0.72
SOD2P04179 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.56■□□□□ 0.72
SOD2P04179 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SOD2P04179 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SOD2P04179 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SOD2P04179 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SOD2P04179 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SOD2P04179 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SOD2P04179 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SOD2P04179 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.56■□□□□ 0.72
SOD2P04179 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SOD2P04179 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SOD2P04179 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.55■□□□□ 0.72
SOD2P04179 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOD2P04179 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SOD2P04179 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.55■□□□□ 0.72
SOD2P04179 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SOD2P04179 AC091607.1-201ENST00000490318 1060 ntBASIC19.55■□□□□ 0.72
SOD2P04179 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.55■□□□□ 0.72
SOD2P04179 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.55■□□□□ 0.72
SOD2P04179 AP002469.2-201ENST00000531724 424 ntBASIC19.55■□□□□ 0.72
SOD2P04179 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SOD2P04179 AC011840.4-201ENST00000578471 627 ntBASIC19.55■□□□□ 0.72
SOD2P04179 AC004263.2-201ENST00000617183 678 ntBASIC19.55■□□□□ 0.72
SOD2P04179 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.55■□□□□ 0.72
SOD2P04179 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOD2P04179 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.55■□□□□ 0.72
SOD2P04179 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.55■□□□□ 0.72
SOD2P04179 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOD2P04179 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOD2P04179 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOD2P04179 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOD2P04179 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOD2P04179 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SOD2P04179 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOD2P04179 AFG3L1P-217ENST00000557444 2447 ntBASIC19.54■□□□□ 0.72
SOD2P04179 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOD2P04179 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SOD2P04179 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.54■□□□□ 0.72
SOD2P04179 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.54■□□□□ 0.72
SOD2P04179 KRT16P4-201ENST00000453883 522 ntBASIC19.54■□□□□ 0.72
SOD2P04179 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.54■□□□□ 0.72
SOD2P04179 AL121912.1-201ENST00000603683 238 ntBASIC19.54■□□□□ 0.72
SOD2P04179 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.54■□□□□ 0.72
SOD2P04179 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOD2P04179 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SOD2P04179 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SOD2P04179 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms