Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.36■□□□□ 0.37
PDGFAP04085 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.36■□□□□ 0.37
PDGFAP04085 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PDGFAP04085 BX276092.5-203ENST00000456199 560 ntBASIC17.36■□□□□ 0.37
PDGFAP04085 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.36■□□□□ 0.37
PDGFAP04085 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.36■□□□□ 0.37
PDGFAP04085 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDGFAP04085 AC111152.3-201ENST00000569699 673 ntBASIC17.36■□□□□ 0.37
PDGFAP04085 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.36■□□□□ 0.37
PDGFAP04085 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDGFAP04085 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.36■□□□□ 0.37
PDGFAP04085 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDGFAP04085 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.36■□□□□ 0.37
PDGFAP04085 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.36■□□□□ 0.37
PDGFAP04085 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDGFAP04085 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.36■□□□□ 0.37
PDGFAP04085 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDGFAP04085 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDGFAP04085 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PDGFAP04085 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDGFAP04085 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDGFAP04085 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PDGFAP04085 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDGFAP04085 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PDGFAP04085 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDGFAP04085 AC036111.1-201ENST00000533973 1582 ntBASIC17.36■□□□□ 0.37
PDGFAP04085 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
PDGFAP04085 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.36■□□□□ 0.37
PDGFAP04085 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDGFAP04085 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.35■□□□□ 0.37
PDGFAP04085 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFAP04085 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFAP04085 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFAP04085 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFAP04085 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.35■□□□□ 0.37
PDGFAP04085 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFAP04085 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PDGFAP04085 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.35■□□□□ 0.37
PDGFAP04085 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFAP04085 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFAP04085 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.35■□□□□ 0.37
PDGFAP04085 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.35■□□□□ 0.37
PDGFAP04085 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
PDGFAP04085 AP002414.4-201ENST00000589764 1148 ntBASIC17.35■□□□□ 0.37
PDGFAP04085 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFAP04085 AC079602.3-201ENST00000623931 403 ntBASIC17.35■□□□□ 0.37
PDGFAP04085 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.35■□□□□ 0.37
PDGFAP04085 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFAP04085 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.35■□□□□ 0.37
PDGFAP04085 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFAP04085 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFAP04085 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PDGFAP04085 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.35■□□□□ 0.37
PDGFAP04085 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFAP04085 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDGFAP04085 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PDGFAP04085 AC007613.1-201ENST00000572811 2597 ntBASIC17.35■□□□□ 0.37
PDGFAP04085 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFAP04085 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFAP04085 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFAP04085 AC004870.1-201ENST00000315132 882 ntBASIC17.34■□□□□ 0.37
PDGFAP04085 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PDGFAP04085 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFAP04085 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.34■□□□□ 0.37
PDGFAP04085 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.34■□□□□ 0.37
PDGFAP04085 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.34■□□□□ 0.37
PDGFAP04085 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.34■□□□□ 0.37
PDGFAP04085 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFAP04085 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFAP04085 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.34■□□□□ 0.37
PDGFAP04085 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.34■□□□□ 0.37
PDGFAP04085 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PDGFAP04085 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
PDGFAP04085 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFAP04085 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFAP04085 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFAP04085 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDGFAP04085 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDGFAP04085 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PDGFAP04085 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PDGFAP04085 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
PDGFAP04085 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDGFAP04085 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PDGFAP04085 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PDGFAP04085 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.33■□□□□ 0.37
PDGFAP04085 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDGFAP04085 KRT8P10-201ENST00000450021 1447 ntBASIC17.33■□□□□ 0.36
PDGFAP04085 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFAP04085 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFAP04085 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFAP04085 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFAP04085 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.33■□□□□ 0.36
PDGFAP04085 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFAP04085 AL023284.2-201ENST00000405850 579 ntBASIC17.33■□□□□ 0.36
PDGFAP04085 KRT17P6-201ENST00000453795 1220 ntBASIC17.33■□□□□ 0.36
PDGFAP04085 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDGFAP04085 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.33■□□□□ 0.36
PDGFAP04085 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.33■□□□□ 0.36
PDGFAP04085 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.33■□□□□ 0.36
PDGFAP04085 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms