Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN1O95832 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN1O95832 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN1O95832 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN1O95832 LINC00167-201ENST00000530583 1419 ntBASIC16.57■□□□□ 0.24
CLDN1O95832 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN1O95832 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN1O95832 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN1O95832 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN1O95832 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.57■□□□□ 0.24
CLDN1O95832 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.57■□□□□ 0.24
CLDN1O95832 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.57■□□□□ 0.24
CLDN1O95832 POLD2P1-201ENST00000511220 997 ntBASIC16.57■□□□□ 0.24
CLDN1O95832 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN1O95832 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN1O95832 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CLDN1O95832 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CLDN1O95832 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN1O95832 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN1O95832 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN1O95832 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN1O95832 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN1O95832 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN1O95832 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLDN1O95832 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN1O95832 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CLDN1O95832 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CLDN1O95832 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
CLDN1O95832 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CLDN1O95832 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN1O95832 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN1O95832 AC099336.1-202ENST00000602961 463 ntBASIC16.56■□□□□ 0.24
CLDN1O95832 AL136038.4-201ENST00000603606 1261 ntBASIC16.56■□□□□ 0.24
CLDN1O95832 AL157888.1-201ENST00000631930 593 ntBASIC16.56■□□□□ 0.24
CLDN1O95832 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CLDN1O95832 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 AL391807.1-203ENST00000604392 2365 ntBASIC16.56■□□□□ 0.24
CLDN1O95832 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN1O95832 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN1O95832 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN1O95832 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN1O95832 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN1O95832 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN1O95832 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN1O95832 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.55■□□□□ 0.24
CLDN1O95832 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN1O95832 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.55■□□□□ 0.24
CLDN1O95832 SAPCD2P3-201ENST00000455031 850 ntBASIC16.55■□□□□ 0.24
CLDN1O95832 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN1O95832 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.55■□□□□ 0.24
CLDN1O95832 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.55■□□□□ 0.24
CLDN1O95832 AC064862.7-201ENST00000604520 867 ntBASIC16.55■□□□□ 0.24
CLDN1O95832 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN1O95832 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CLDN1O95832 TP73-AS1-207ENST00000624167 988 ntBASIC16.55■□□□□ 0.24
CLDN1O95832 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.55■□□□□ 0.24
CLDN1O95832 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN1O95832 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN1O95832 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN1O95832 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN1O95832 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN1O95832 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN1O95832 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN1O95832 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN1O95832 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN1O95832 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN1O95832 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN1O95832 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN1O95832 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
CLDN1O95832 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN1O95832 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN1O95832 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CLDN1O95832 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN1O95832 AC087289.5-201ENST00000586076 3175 ntBASIC16.54■□□□□ 0.24
CLDN1O95832 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN1O95832 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN1O95832 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN1O95832 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN1O95832 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN1O95832 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN1O95832 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN1O95832 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CLDN1O95832 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms