Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT4O95628 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.51■□□□□ 0.23
CNOT4O95628 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT4O95628 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT4O95628 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CNOT4O95628 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT4O95628 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT4O95628 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.51■□□□□ 0.23
CNOT4O95628 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.51■□□□□ 0.23
CNOT4O95628 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.51■□□□□ 0.23
CNOT4O95628 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.51■□□□□ 0.23
CNOT4O95628 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT4O95628 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.51■□□□□ 0.23
CNOT4O95628 TSPY5P-201ENST00000426936 936 ntBASIC16.51■□□□□ 0.23
CNOT4O95628 AC009947.2-201ENST00000444014 672 ntBASIC16.51■□□□□ 0.23
CNOT4O95628 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.51■□□□□ 0.23
CNOT4O95628 AC063952.2-201ENST00000498792 1227 ntBASIC16.51■□□□□ 0.23
CNOT4O95628 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.51■□□□□ 0.23
CNOT4O95628 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.51■□□□□ 0.23
CNOT4O95628 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.51■□□□□ 0.23
CNOT4O95628 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.51■□□□□ 0.23
CNOT4O95628 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.51■□□□□ 0.23
CNOT4O95628 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CNOT4O95628 AC139887.4-201ENST00000607877 719 ntBASIC16.51■□□□□ 0.23
CNOT4O95628 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.51■□□□□ 0.23
CNOT4O95628 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CNOT4O95628 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT4O95628 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.51■□□□□ 0.23
CNOT4O95628 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.51■□□□□ 0.23
CNOT4O95628 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT4O95628 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT4O95628 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT4O95628 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT4O95628 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT4O95628 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT4O95628 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.51■□□□□ 0.23
CNOT4O95628 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNOT4O95628 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CNOT4O95628 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.51■□□□□ 0.23
CNOT4O95628 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT4O95628 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.5■□□□□ 0.23
CNOT4O95628 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT4O95628 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT4O95628 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT4O95628 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT4O95628 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT4O95628 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT4O95628 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CNOT4O95628 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT4O95628 FAM8A6P-201ENST00000407496 1135 ntBASIC16.5■□□□□ 0.23
CNOT4O95628 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.5■□□□□ 0.23
CNOT4O95628 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.5■□□□□ 0.23
CNOT4O95628 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.5■□□□□ 0.23
CNOT4O95628 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.5■□□□□ 0.23
CNOT4O95628 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.5■□□□□ 0.23
CNOT4O95628 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.5■□□□□ 0.23
CNOT4O95628 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.5■□□□□ 0.23
CNOT4O95628 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT4O95628 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CNOT4O95628 AC068587.9-201ENST00000641814 219 ntBASIC16.5■□□□□ 0.23
CNOT4O95628 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.5■□□□□ 0.23
CNOT4O95628 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT4O95628 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.5■□□□□ 0.23
CNOT4O95628 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT4O95628 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT4O95628 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CNOT4O95628 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.5■□□□□ 0.23
CNOT4O95628 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT4O95628 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.5■□□□□ 0.23
CNOT4O95628 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT4O95628 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT4O95628 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT4O95628 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNOT4O95628 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT4O95628 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT4O95628 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT4O95628 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CNOT4O95628 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CNOT4O95628 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT4O95628 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT4O95628 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT4O95628 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT4O95628 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CNOT4O95628 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT4O95628 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT4O95628 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CNOT4O95628 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.49■□□□□ 0.23
CNOT4O95628 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.49■□□□□ 0.23
CNOT4O95628 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT4O95628 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT4O95628 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.49■□□□□ 0.23
CNOT4O95628 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.49■□□□□ 0.23
CNOT4O95628 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.49■□□□□ 0.23
CNOT4O95628 HOXB1-202ENST00000577092 1414 ntBASIC16.49■□□□□ 0.23
CNOT4O95628 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.49■□□□□ 0.23
CNOT4O95628 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.49■□□□□ 0.23
CNOT4O95628 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.49■□□□□ 0.23
CNOT4O95628 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNOT4O95628 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
CNOT4O95628 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms