Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST1O76090 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST1O76090 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BEST1O76090 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.49■□□□□ 0.71
BEST1O76090 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST1O76090 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.49■□□□□ 0.71
BEST1O76090 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST1O76090 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BEST1O76090 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.49■□□□□ 0.71
BEST1O76090 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST1O76090 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST1O76090 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.49■□□□□ 0.71
BEST1O76090 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.49■□□□□ 0.71
BEST1O76090 ZNF444P1-201ENST00000559497 298 ntBASIC19.49■□□□□ 0.71
BEST1O76090 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.49■□□□□ 0.71
BEST1O76090 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.49■□□□□ 0.71
BEST1O76090 AL358472.4-201ENST00000633140 710 ntBASIC19.49■□□□□ 0.71
BEST1O76090 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST1O76090 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST1O76090 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BEST1O76090 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
BEST1O76090 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
BEST1O76090 AL391807.1-203ENST00000604392 2365 ntBASIC19.49■□□□□ 0.71
BEST1O76090 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.49■□□□□ 0.71
BEST1O76090 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
BEST1O76090 AC004408.2-201ENST00000623613 2777 ntBASIC19.49■□□□□ 0.71
BEST1O76090 MYLKP1-201ENST00000509077 1580 ntBASIC19.49■□□□□ 0.71
BEST1O76090 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.48■□□□□ 0.71
BEST1O76090 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST1O76090 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST1O76090 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.48■□□□□ 0.71
BEST1O76090 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST1O76090 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST1O76090 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST1O76090 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST1O76090 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BEST1O76090 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST1O76090 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.48■□□□□ 0.71
BEST1O76090 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST1O76090 AL121956.5-201ENST00000625261 221 ntBASIC19.48■□□□□ 0.71
BEST1O76090 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
BEST1O76090 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST1O76090 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.48■□□□□ 0.71
BEST1O76090 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.48■□□□□ 0.71
BEST1O76090 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST1O76090 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST1O76090 AC005332.1-201ENST00000577698 1310 ntBASIC19.48■□□□□ 0.71
BEST1O76090 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
BEST1O76090 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
BEST1O76090 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST1O76090 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
BEST1O76090 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BEST1O76090 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.47■□□□□ 0.71
BEST1O76090 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.47■□□□□ 0.71
BEST1O76090 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BEST1O76090 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BEST1O76090 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BEST1O76090 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
BEST1O76090 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BEST1O76090 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BEST1O76090 AP000593.1-201ENST00000393668 712 ntBASIC19.47■□□□□ 0.71
BEST1O76090 HLA-F-220ENST00000434407 884 ntBASIC19.47■□□□□ 0.71
BEST1O76090 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BEST1O76090 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BEST1O76090 AC126763.1-201ENST00000552015 2118 ntBASIC19.47■□□□□ 0.71
BEST1O76090 MIR3180-4-201ENST00000582223 153 ntBASIC19.47■□□□□ 0.71
BEST1O76090 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BEST1O76090 AC112777.1-201ENST00000540175 1423 ntBASIC19.47■□□□□ 0.71
BEST1O76090 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BEST1O76090 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.47■□□□□ 0.71
BEST1O76090 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BEST1O76090 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BEST1O76090 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
BEST1O76090 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
BEST1O76090 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
BEST1O76090 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.47■□□□□ 0.71
BEST1O76090 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BEST1O76090 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.47■□□□□ 0.71
BEST1O76090 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.47■□□□□ 0.71
BEST1O76090 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BEST1O76090 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BEST1O76090 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.46■□□□□ 0.71
BEST1O76090 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BEST1O76090 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.46■□□□□ 0.71
BEST1O76090 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BEST1O76090 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
BEST1O76090 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BEST1O76090 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BEST1O76090 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BEST1O76090 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BEST1O76090 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.46■□□□□ 0.71
BEST1O76090 AL136038.4-201ENST00000603606 1261 ntBASIC19.46■□□□□ 0.71
BEST1O76090 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.46■□□□□ 0.71
BEST1O76090 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
BEST1O76090 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
BEST1O76090 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
BEST1O76090 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BEST1O76090 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
BEST1O76090 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
BEST1O76090 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms