Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1BO75841 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.22■□□□□ 0.19
UPK1BO75841 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.22■□□□□ 0.19
UPK1BO75841 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.22■□□□□ 0.19
UPK1BO75841 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1BO75841 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1BO75841 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1BO75841 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
UPK1BO75841 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1BO75841 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.22■□□□□ 0.19
UPK1BO75841 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1BO75841 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
UPK1BO75841 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1BO75841 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1BO75841 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
UPK1BO75841 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
UPK1BO75841 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1BO75841 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
UPK1BO75841 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
UPK1BO75841 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1BO75841 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.21■□□□□ 0.19
UPK1BO75841 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1BO75841 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
UPK1BO75841 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1BO75841 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
UPK1BO75841 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1BO75841 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1BO75841 AC012354.3-201ENST00000623734 483 ntBASIC16.21■□□□□ 0.19
UPK1BO75841 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.21■□□□□ 0.19
UPK1BO75841 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1BO75841 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
UPK1BO75841 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1BO75841 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1BO75841 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
UPK1BO75841 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
UPK1BO75841 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
UPK1BO75841 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.18
UPK1BO75841 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 TSPY26P-201ENST00000476365 1326 ntBASIC16.2■□□□□ 0.18
UPK1BO75841 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
UPK1BO75841 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
UPK1BO75841 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.2■□□□□ 0.18
UPK1BO75841 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.2■□□□□ 0.18
UPK1BO75841 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
UPK1BO75841 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
UPK1BO75841 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.2■□□□□ 0.18
UPK1BO75841 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.2■□□□□ 0.18
UPK1BO75841 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.2■□□□□ 0.18
UPK1BO75841 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.2■□□□□ 0.18
UPK1BO75841 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
UPK1BO75841 HEIH-201ENST00000623091 1652 ntBASIC16.2■□□□□ 0.18
UPK1BO75841 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
UPK1BO75841 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.2■□□□□ 0.18
UPK1BO75841 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.2■□□□□ 0.18
UPK1BO75841 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UPK1BO75841 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1BO75841 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.19■□□□□ 0.18
UPK1BO75841 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1BO75841 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1BO75841 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1BO75841 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
UPK1BO75841 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
UPK1BO75841 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.19■□□□□ 0.18
UPK1BO75841 PCDHA14-201ENST00000506751 2298 ntBASIC16.19■□□□□ 0.18
UPK1BO75841 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1BO75841 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1BO75841 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1BO75841 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1BO75841 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.19■□□□□ 0.18
UPK1BO75841 AC023632.3-201ENST00000521633 145 ntBASIC16.19■□□□□ 0.18
UPK1BO75841 KRT18P20-201ENST00000548986 1279 ntBASIC16.19■□□□□ 0.18
UPK1BO75841 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1BO75841 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1BO75841 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1BO75841 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1BO75841 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1BO75841 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
UPK1BO75841 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1BO75841 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1BO75841 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UPK1BO75841 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms