Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF253O75346 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF253O75346 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
ZNF253O75346 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
ZNF253O75346 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF253O75346 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF253O75346 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.47□□□□□ -0.09
ZNF253O75346 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.47□□□□□ -0.09
ZNF253O75346 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF253O75346 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF253O75346 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF253O75346 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
ZNF253O75346 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.47□□□□□ -0.09
ZNF253O75346 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF253O75346 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.47□□□□□ -0.09
ZNF253O75346 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
ZNF253O75346 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF253O75346 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF253O75346 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF253O75346 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ZNF253O75346 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.47□□□□□ -0.09
ZNF253O75346 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.47□□□□□ -0.09
ZNF253O75346 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF253O75346 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.47□□□□□ -0.09
ZNF253O75346 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF253O75346 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.47□□□□□ -0.09
ZNF253O75346 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.47□□□□□ -0.09
ZNF253O75346 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF253O75346 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.47□□□□□ -0.09
ZNF253O75346 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF253O75346 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
ZNF253O75346 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF253O75346 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.46□□□□□ -0.09
ZNF253O75346 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ZNF253O75346 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ZNF253O75346 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
ZNF253O75346 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.46□□□□□ -0.09
ZNF253O75346 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.46□□□□□ -0.09
ZNF253O75346 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ZNF253O75346 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.46□□□□□ -0.09
ZNF253O75346 TSPY6P-201ENST00000448518 926 ntBASIC14.46□□□□□ -0.09
ZNF253O75346 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.46□□□□□ -0.09
ZNF253O75346 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.46□□□□□ -0.09
ZNF253O75346 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.46□□□□□ -0.09
ZNF253O75346 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.46□□□□□ -0.09
ZNF253O75346 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
ZNF253O75346 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
ZNF253O75346 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.46□□□□□ -0.09
ZNF253O75346 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
ZNF253O75346 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
ZNF253O75346 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF253O75346 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ZNF253O75346 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF253O75346 ANO7L1-203ENST00000602586 1720 ntBASIC14.46□□□□□ -0.1
ZNF253O75346 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF253O75346 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF253O75346 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF253O75346 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
ZNF253O75346 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.46□□□□□ -0.1
ZNF253O75346 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
ZNF253O75346 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF253O75346 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
ZNF253O75346 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
ZNF253O75346 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
ZNF253O75346 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF253O75346 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF253O75346 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF253O75346 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF253O75346 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
ZNF253O75346 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF253O75346 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF253O75346 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF253O75346 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF253O75346 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF253O75346 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF253O75346 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF253O75346 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF253O75346 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF253O75346 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms