Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
PTCD1O75127 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC23.83■■□□□ 1.41
PTCD1O75127 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTCD1O75127 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTCD1O75127 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
PTCD1O75127 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTCD1O75127 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTCD1O75127 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
PTCD1O75127 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTCD1O75127 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC23.83■■□□□ 1.41
PTCD1O75127 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC23.83■■□□□ 1.41
PTCD1O75127 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC23.83■■□□□ 1.41
PTCD1O75127 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PTCD1O75127 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD1O75127 AL357033.4-201ENST00000617703 1807 ntBASIC23.82■■□□□ 1.4
PTCD1O75127 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD1O75127 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD1O75127 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD1O75127 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD1O75127 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC23.82■■□□□ 1.4
PTCD1O75127 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD1O75127 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
PTCD1O75127 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC23.82■■□□□ 1.4
PTCD1O75127 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC23.82■■□□□ 1.4
PTCD1O75127 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC23.82■■□□□ 1.4
PTCD1O75127 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD1O75127 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD1O75127 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD1O75127 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD1O75127 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD1O75127 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.82■■□□□ 1.4
PTCD1O75127 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD1O75127 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTCD1O75127 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
PTCD1O75127 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD1O75127 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.81■■□□□ 1.4
PTCD1O75127 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD1O75127 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD1O75127 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PTCD1O75127 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD1O75127 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PTCD1O75127 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD1O75127 NUS1P2-201ENST00000417358 873 ntBASIC23.81■■□□□ 1.4
PTCD1O75127 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD1O75127 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.81■■□□□ 1.4
PTCD1O75127 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD1O75127 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC23.81■■□□□ 1.4
PTCD1O75127 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD1O75127 KRT8P50-201ENST00000562022 1438 ntBASIC23.81■■□□□ 1.4
PTCD1O75127 AC099343.3-201ENST00000605834 2503 ntBASIC23.81■■□□□ 1.4
PTCD1O75127 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD1O75127 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.81■■□□□ 1.4
PTCD1O75127 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC23.81■■□□□ 1.4
PTCD1O75127 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD1O75127 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD1O75127 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD1O75127 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD1O75127 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
PTCD1O75127 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTCD1O75127 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD1O75127 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23.8■■□□□ 1.4
PTCD1O75127 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD1O75127 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD1O75127 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD1O75127 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD1O75127 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD1O75127 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC23.8■■□□□ 1.4
PTCD1O75127 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC23.8■■□□□ 1.4
PTCD1O75127 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
PTCD1O75127 VPS51-217ENST00000639871 243 ntTSL 5 BASIC23.8■■□□□ 1.4
PTCD1O75127 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD1O75127 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD1O75127 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD1O75127 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PTCD1O75127 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD1O75127 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD1O75127 HLA-A-201ENST00000376802 1334 ntBASIC23.8■■□□□ 1.4
PTCD1O75127 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTCD1O75127 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
PTCD1O75127 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTCD1O75127 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCD1O75127 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCD1O75127 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTCD1O75127 TSPY12P-201ENST00000421279 868 ntBASIC23.79■■□□□ 1.4
PTCD1O75127 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
PTCD1O75127 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTCD1O75127 ABR-217ENST00000572441 563 ntTSL 4 BASIC23.79■■□□□ 1.4
PTCD1O75127 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC23.79■■□□□ 1.4
PTCD1O75127 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC23.79■■□□□ 1.4
PTCD1O75127 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.79■■□□□ 1.4
PTCD1O75127 CCNC-219ENST00000627680 896 ntTSL 5 BASIC23.79■■□□□ 1.4
PTCD1O75127 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
PTCD1O75127 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
PTCD1O75127 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.79■■□□□ 1.4
PTCD1O75127 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PTCD1O75127 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.79■■□□□ 1.4
PTCD1O75127 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC23.79■■□□□ 1.4
PTCD1O75127 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
PTCD1O75127 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.79■■□□□ 1.4
PTCD1O75127 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms