Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC104581.1-202ENST00000635932 2618 ntBASIC17.76■□□□□ 0.43
LCMT2O60294 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCMT2O60294 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCMT2O60294 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCMT2O60294 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCMT2O60294 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCMT2O60294 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCMT2O60294 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LCMT2O60294 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCMT2O60294 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LCMT2O60294 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.76■□□□□ 0.43
LCMT2O60294 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.76■□□□□ 0.43
LCMT2O60294 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.76■□□□□ 0.43
LCMT2O60294 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.76■□□□□ 0.43
LCMT2O60294 BX664615.1-201ENST00000443558 458 ntBASIC17.76■□□□□ 0.43
LCMT2O60294 AC104076.2-201ENST00000448912 469 ntBASIC17.76■□□□□ 0.43
LCMT2O60294 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LCMT2O60294 RN7SL850P-201ENST00000579959 291 ntBASIC17.76■□□□□ 0.43
LCMT2O60294 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.76■□□□□ 0.43
LCMT2O60294 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.76■□□□□ 0.43
LCMT2O60294 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LCMT2O60294 AC139887.4-201ENST00000607877 719 ntBASIC17.76■□□□□ 0.43
LCMT2O60294 AL023973.1-201ENST00000624619 620 ntBASIC17.76■□□□□ 0.43
LCMT2O60294 AC092865.7-201ENST00000641832 219 ntBASIC17.76■□□□□ 0.43
LCMT2O60294 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.76■□□□□ 0.43
LCMT2O60294 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LCMT2O60294 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCMT2O60294 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCMT2O60294 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LCMT2O60294 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LCMT2O60294 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCMT2O60294 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.76■□□□□ 0.43
LCMT2O60294 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.76■□□□□ 0.43
LCMT2O60294 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCMT2O60294 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.76■□□□□ 0.43
LCMT2O60294 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.76■□□□□ 0.43
LCMT2O60294 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LCMT2O60294 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
LCMT2O60294 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LCMT2O60294 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCMT2O60294 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCMT2O60294 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCMT2O60294 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LCMT2O60294 MYLKP1-201ENST00000509077 1580 ntBASIC17.75■□□□□ 0.43
LCMT2O60294 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCMT2O60294 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
LCMT2O60294 KRT8P7-201ENST00000533003 1432 ntBASIC17.75■□□□□ 0.43
LCMT2O60294 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.75■□□□□ 0.43
LCMT2O60294 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCMT2O60294 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCMT2O60294 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCMT2O60294 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.75■□□□□ 0.43
LCMT2O60294 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.75■□□□□ 0.43
LCMT2O60294 SEC1P-202ENST00000473944 940 ntBASIC17.75■□□□□ 0.43
LCMT2O60294 KRT18P21-201ENST00000515767 1272 ntBASIC17.75■□□□□ 0.43
LCMT2O60294 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.75■□□□□ 0.43
LCMT2O60294 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LCMT2O60294 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.75■□□□□ 0.43
LCMT2O60294 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.75■□□□□ 0.43
LCMT2O60294 AC011558.1-201ENST00000623459 338 ntBASIC17.75■□□□□ 0.43
LCMT2O60294 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCMT2O60294 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.75■□□□□ 0.43
LCMT2O60294 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
LCMT2O60294 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.75■□□□□ 0.43
LCMT2O60294 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCMT2O60294 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LCMT2O60294 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCMT2O60294 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCMT2O60294 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCMT2O60294 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LCMT2O60294 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LCMT2O60294 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.74■□□□□ 0.43
LCMT2O60294 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.74■□□□□ 0.43
LCMT2O60294 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LCMT2O60294 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LCMT2O60294 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.74■□□□□ 0.43
LCMT2O60294 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LCMT2O60294 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LCMT2O60294 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
LCMT2O60294 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LCMT2O60294 AC117947.1-201ENST00000427448 529 ntBASIC17.74■□□□□ 0.43
LCMT2O60294 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.74■□□□□ 0.43
LCMT2O60294 COX11P1-201ENST00000489116 835 ntBASIC17.74■□□□□ 0.43
LCMT2O60294 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.74■□□□□ 0.43
LCMT2O60294 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.74■□□□□ 0.43
LCMT2O60294 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LCMT2O60294 AC104390.1-201ENST00000555663 520 ntBASIC17.74■□□□□ 0.43
LCMT2O60294 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.74■□□□□ 0.43
LCMT2O60294 GCSHP2-201ENST00000560971 527 ntBASIC17.74■□□□□ 0.43
LCMT2O60294 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.74■□□□□ 0.43
LCMT2O60294 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
LCMT2O60294 AC006011.2-201ENST00000621313 1158 ntBASIC17.74■□□□□ 0.43
LCMT2O60294 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.74■□□□□ 0.43
LCMT2O60294 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LCMT2O60294 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LCMT2O60294 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LCMT2O60294 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LCMT2O60294 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LCMT2O60294 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.74■□□□□ 0.43
LCMT2O60294 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms