Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 YBX1P10-201ENST00000444752 975 ntBASIC14.42□□□□□ -0.1
PDE6DO43924 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.42□□□□□ -0.1
PDE6DO43924 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
PDE6DO43924 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
PDE6DO43924 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PDE6DO43924 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.42□□□□□ -0.1
PDE6DO43924 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.42□□□□□ -0.1
PDE6DO43924 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PDE6DO43924 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PDE6DO43924 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PDE6DO43924 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.41□□□□□ -0.1
PDE6DO43924 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.41□□□□□ -0.1
PDE6DO43924 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.41□□□□□ -0.1
PDE6DO43924 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PDE6DO43924 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PDE6DO43924 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.41□□□□□ -0.1
PDE6DO43924 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.41□□□□□ -0.1
PDE6DO43924 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PDE6DO43924 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.41□□□□□ -0.1
PDE6DO43924 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.41□□□□□ -0.1
PDE6DO43924 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.41□□□□□ -0.1
PDE6DO43924 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
PDE6DO43924 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.41□□□□□ -0.1
PDE6DO43924 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.41□□□□□ -0.1
PDE6DO43924 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.41□□□□□ -0.1
PDE6DO43924 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.41□□□□□ -0.1
PDE6DO43924 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PDE6DO43924 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PDE6DO43924 AL499627.1-201ENST00000569373 2188 ntBASIC14.41□□□□□ -0.1
PDE6DO43924 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
PDE6DO43924 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.41□□□□□ -0.1
PDE6DO43924 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PDE6DO43924 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDE6DO43924 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDE6DO43924 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDE6DO43924 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDE6DO43924 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.4□□□□□ -0.1
PDE6DO43924 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDE6DO43924 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.4□□□□□ -0.1
PDE6DO43924 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDE6DO43924 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDE6DO43924 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDE6DO43924 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
PDE6DO43924 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.4□□□□□ -0.1
PDE6DO43924 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.4□□□□□ -0.1
PDE6DO43924 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PDE6DO43924 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.4□□□□□ -0.1
PDE6DO43924 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.4□□□□□ -0.1
PDE6DO43924 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.4□□□□□ -0.1
PDE6DO43924 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.4□□□□□ -0.1
PDE6DO43924 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDE6DO43924 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.4□□□□□ -0.1
PDE6DO43924 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDE6DO43924 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDE6DO43924 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PDE6DO43924 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PDE6DO43924 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PDE6DO43924 AL023806.1-201ENST00000603994 1649 ntBASIC14.4□□□□□ -0.1
PDE6DO43924 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.4□□□□□ -0.1
PDE6DO43924 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.4□□□□□ -0.1
PDE6DO43924 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.4□□□□□ -0.1
PDE6DO43924 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PDE6DO43924 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.4□□□□□ -0.1
PDE6DO43924 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.4□□□□□ -0.1
PDE6DO43924 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
PDE6DO43924 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PDE6DO43924 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.39□□□□□ -0.11
PDE6DO43924 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PDE6DO43924 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.39□□□□□ -0.11
PDE6DO43924 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms