Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
XRCC2O43543 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
XRCC2O43543 MCCD1P1-208ENST00000445732 328 ntBASIC16.17■□□□□ 0.18
XRCC2O43543 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.17■□□□□ 0.18
XRCC2O43543 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
XRCC2O43543 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.17■□□□□ 0.18
XRCC2O43543 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.17■□□□□ 0.18
XRCC2O43543 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.17■□□□□ 0.18
XRCC2O43543 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.17■□□□□ 0.18
XRCC2O43543 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
XRCC2O43543 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.17■□□□□ 0.18
XRCC2O43543 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
XRCC2O43543 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
XRCC2O43543 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
XRCC2O43543 KRT8P45-201ENST00000414328 1447 ntBASIC16.17■□□□□ 0.18
XRCC2O43543 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.17■□□□□ 0.18
XRCC2O43543 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
XRCC2O43543 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
XRCC2O43543 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
XRCC2O43543 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
XRCC2O43543 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
XRCC2O43543 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
XRCC2O43543 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.16■□□□□ 0.18
XRCC2O43543 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
XRCC2O43543 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
XRCC2O43543 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
XRCC2O43543 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
XRCC2O43543 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
XRCC2O43543 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.16■□□□□ 0.18
XRCC2O43543 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
XRCC2O43543 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
XRCC2O43543 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.16■□□□□ 0.18
XRCC2O43543 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.16■□□□□ 0.18
XRCC2O43543 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
XRCC2O43543 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.16■□□□□ 0.18
XRCC2O43543 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 KRT17P2-201ENST00000300992 1314 ntBASIC16.16■□□□□ 0.18
XRCC2O43543 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.16■□□□□ 0.18
XRCC2O43543 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.16■□□□□ 0.18
XRCC2O43543 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
XRCC2O43543 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.16■□□□□ 0.18
XRCC2O43543 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
XRCC2O43543 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.15■□□□□ 0.18
XRCC2O43543 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.15■□□□□ 0.18
XRCC2O43543 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.15■□□□□ 0.18
XRCC2O43543 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
XRCC2O43543 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.15■□□□□ 0.18
XRCC2O43543 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.15■□□□□ 0.18
XRCC2O43543 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
XRCC2O43543 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.15■□□□□ 0.18
XRCC2O43543 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.15■□□□□ 0.18
XRCC2O43543 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.15■□□□□ 0.18
XRCC2O43543 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
XRCC2O43543 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.15■□□□□ 0.18
XRCC2O43543 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
XRCC2O43543 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.15■□□□□ 0.18
XRCC2O43543 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
XRCC2O43543 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
XRCC2O43543 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
XRCC2O43543 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.14■□□□□ 0.17
XRCC2O43543 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
XRCC2O43543 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms