Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MIR3917-201ENST00000580971 93 ntBASIC23.06■■□□□ 1.28
SRGAP3O43295 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC23.06■■□□□ 1.28
SRGAP3O43295 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SRGAP3O43295 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SRGAP3O43295 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC23.06■■□□□ 1.28
SRGAP3O43295 AL157888.1-201ENST00000631930 593 ntBASIC23.06■■□□□ 1.28
SRGAP3O43295 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SRGAP3O43295 AC112777.1-201ENST00000540175 1423 ntBASIC23.06■■□□□ 1.28
SRGAP3O43295 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
SRGAP3O43295 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SRGAP3O43295 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SRGAP3O43295 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC23.06■■□□□ 1.28
SRGAP3O43295 AC005082.1-201ENST00000413042 2259 ntBASIC23.06■■□□□ 1.28
SRGAP3O43295 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SRGAP3O43295 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.06■■□□□ 1.28
SRGAP3O43295 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SRGAP3O43295 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC23.06■■□□□ 1.28
SRGAP3O43295 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SRGAP3O43295 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SRGAP3O43295 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC23.05■■□□□ 1.28
SRGAP3O43295 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SRGAP3O43295 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SRGAP3O43295 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC23.05■■□□□ 1.28
SRGAP3O43295 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SRGAP3O43295 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SRGAP3O43295 MYLKP1-201ENST00000509077 1580 ntBASIC23.05■■□□□ 1.28
SRGAP3O43295 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC23.05■■□□□ 1.28
SRGAP3O43295 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SRGAP3O43295 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
SRGAP3O43295 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC23.05■■□□□ 1.28
SRGAP3O43295 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC23.05■■□□□ 1.28
SRGAP3O43295 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SRGAP3O43295 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC23.04■■□□□ 1.28
SRGAP3O43295 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
SRGAP3O43295 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SRGAP3O43295 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SRGAP3O43295 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SRGAP3O43295 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
SRGAP3O43295 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SRGAP3O43295 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SRGAP3O43295 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
SRGAP3O43295 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SRGAP3O43295 AC034232.1-201ENST00000506026 1064 ntBASIC23.04■■□□□ 1.28
SRGAP3O43295 LINC01238-205ENST00000567549 1107 ntBASIC23.04■■□□□ 1.28
SRGAP3O43295 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC23.04■■□□□ 1.28
SRGAP3O43295 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.04■■□□□ 1.28
SRGAP3O43295 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
SRGAP3O43295 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SRGAP3O43295 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SRGAP3O43295 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SRGAP3O43295 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SRGAP3O43295 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SRGAP3O43295 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SRGAP3O43295 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SRGAP3O43295 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC23.04■■□□□ 1.28
SRGAP3O43295 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SRGAP3O43295 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC23.03■■□□□ 1.28
SRGAP3O43295 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC23.03■■□□□ 1.28
SRGAP3O43295 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SRGAP3O43295 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SRGAP3O43295 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SRGAP3O43295 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
SRGAP3O43295 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC23.03■■□□□ 1.28
SRGAP3O43295 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SRGAP3O43295 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SRGAP3O43295 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SRGAP3O43295 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC23.03■■□□□ 1.28
SRGAP3O43295 KRT18P35-201ENST00000510488 1269 ntBASIC23.03■■□□□ 1.28
SRGAP3O43295 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SRGAP3O43295 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC23.03■■□□□ 1.28
SRGAP3O43295 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC23.03■■□□□ 1.28
SRGAP3O43295 AL445228.2-201ENST00000605589 952 ntBASIC23.03■■□□□ 1.28
SRGAP3O43295 MYC-208ENST00000641036 567 ntBASIC23.03■■□□□ 1.28
SRGAP3O43295 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SRGAP3O43295 RNF165-205ENST00000588679 2904 ntBASIC23.03■■□□□ 1.28
SRGAP3O43295 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.03■■□□□ 1.28
SRGAP3O43295 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SRGAP3O43295 AC126763.1-201ENST00000552015 2118 ntBASIC23.03■■□□□ 1.28
SRGAP3O43295 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SRGAP3O43295 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SRGAP3O43295 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SRGAP3O43295 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SRGAP3O43295 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SRGAP3O43295 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.02■■□□□ 1.28
SRGAP3O43295 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SRGAP3O43295 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SRGAP3O43295 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SRGAP3O43295 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SRGAP3O43295 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
SRGAP3O43295 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SRGAP3O43295 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC23.02■■□□□ 1.28
SRGAP3O43295 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SRGAP3O43295 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.02■■□□□ 1.28
SRGAP3O43295 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC23.02■■□□□ 1.28
SRGAP3O43295 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC23.02■■□□□ 1.28
SRGAP3O43295 DFFB-212ENST00000625756 649 ntTSL 5 BASIC23.02■■□□□ 1.28
SRGAP3O43295 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SRGAP3O43295 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC23.02■■□□□ 1.28
SRGAP3O43295 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SRGAP3O43295 AL163051.1-201ENST00000569214 1512 ntBASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms