Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RRP8O43159 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.44■□□□□ 0.38
RRP8O43159 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RRP8O43159 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RRP8O43159 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RRP8O43159 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RRP8O43159 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RRP8O43159 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RRP8O43159 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RRP8O43159 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RRP8O43159 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.43■□□□□ 0.38
RRP8O43159 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RRP8O43159 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.43■□□□□ 0.38
RRP8O43159 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.43■□□□□ 0.38
RRP8O43159 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.43■□□□□ 0.38
RRP8O43159 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.43■□□□□ 0.38
RRP8O43159 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
RRP8O43159 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.43■□□□□ 0.38
RRP8O43159 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.43■□□□□ 0.38
RRP8O43159 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.43■□□□□ 0.38
RRP8O43159 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.43■□□□□ 0.38
RRP8O43159 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RRP8O43159 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.43■□□□□ 0.38
RRP8O43159 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.43■□□□□ 0.38
RRP8O43159 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
RRP8O43159 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RRP8O43159 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RRP8O43159 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RRP8O43159 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.42■□□□□ 0.38
RRP8O43159 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.42■□□□□ 0.38
RRP8O43159 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RRP8O43159 AC243591.1-201ENST00000452967 1364 ntBASIC17.42■□□□□ 0.38
RRP8O43159 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RRP8O43159 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RRP8O43159 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RRP8O43159 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RRP8O43159 HOXB1-202ENST00000577092 1414 ntBASIC17.42■□□□□ 0.38
RRP8O43159 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RRP8O43159 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RRP8O43159 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RRP8O43159 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.42■□□□□ 0.38
RRP8O43159 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.42■□□□□ 0.38
RRP8O43159 PMS2P2-201ENST00000425039 1128 ntBASIC17.42■□□□□ 0.38
RRP8O43159 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RRP8O43159 RN7SL606P-201ENST00000472779 293 ntBASIC17.42■□□□□ 0.38
RRP8O43159 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.42■□□□□ 0.38
RRP8O43159 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.42■□□□□ 0.38
RRP8O43159 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.42■□□□□ 0.38
RRP8O43159 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.42■□□□□ 0.38
RRP8O43159 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.42■□□□□ 0.38
RRP8O43159 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RRP8O43159 AC008608.2-201ENST00000606089 416 ntBASIC17.42■□□□□ 0.38
RRP8O43159 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RRP8O43159 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RRP8O43159 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.42■□□□□ 0.38
RRP8O43159 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RRP8O43159 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RRP8O43159 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.42■□□□□ 0.38
RRP8O43159 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.42■□□□□ 0.38
RRP8O43159 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RRP8O43159 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RRP8O43159 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
RRP8O43159 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RRP8O43159 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RRP8O43159 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
RRP8O43159 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.41■□□□□ 0.38
RRP8O43159 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RRP8O43159 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RRP8O43159 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.41■□□□□ 0.38
RRP8O43159 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RRP8O43159 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.41■□□□□ 0.38
RRP8O43159 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RRP8O43159 MIR564-202ENST00000385049 94 ntBASIC17.41■□□□□ 0.38
RRP8O43159 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.41■□□□□ 0.38
RRP8O43159 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RRP8O43159 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RRP8O43159 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.41■□□□□ 0.38
RRP8O43159 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.41■□□□□ 0.38
RRP8O43159 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RRP8O43159 AC148477.8-201ENST00000624298 468 ntBASIC17.41■□□□□ 0.38
RRP8O43159 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RRP8O43159 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RRP8O43159 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms