Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.14■□□□□ 0.82
TNRC18O15417 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TNRC18O15417 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.14■□□□□ 0.82
TNRC18O15417 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.14■□□□□ 0.82
TNRC18O15417 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.14■□□□□ 0.82
TNRC18O15417 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNRC18O15417 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TNRC18O15417 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNRC18O15417 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TNRC18O15417 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TNRC18O15417 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.14■□□□□ 0.81
TNRC18O15417 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TNRC18O15417 SPDYE22P-201ENST00000582158 798 ntBASIC20.14■□□□□ 0.81
TNRC18O15417 AC022145.2-201ENST00000598203 171 ntBASIC20.14■□□□□ 0.81
TNRC18O15417 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.14■□□□□ 0.81
TNRC18O15417 AL513210.1-201ENST00000629608 234 ntBASIC20.14■□□□□ 0.81
TNRC18O15417 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.14■□□□□ 0.81
TNRC18O15417 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNRC18O15417 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TNRC18O15417 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TNRC18O15417 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TNRC18O15417 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNRC18O15417 AC023141.5-201ENST00000458585 616 ntBASIC20.13■□□□□ 0.81
TNRC18O15417 NKAPP1-205ENST00000585790 367 ntBASIC20.13■□□□□ 0.81
TNRC18O15417 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.13■□□□□ 0.81
TNRC18O15417 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNRC18O15417 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.13■□□□□ 0.81
TNRC18O15417 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNRC18O15417 AC008556.1-201ENST00000610908 2040 ntBASIC20.13■□□□□ 0.81
TNRC18O15417 KRT8P7-201ENST00000533003 1432 ntBASIC20.13■□□□□ 0.81
TNRC18O15417 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
TNRC18O15417 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNRC18O15417 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNRC18O15417 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNRC18O15417 AL596325.1-201ENST00000563991 1082 ntBASIC20.13■□□□□ 0.81
TNRC18O15417 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNRC18O15417 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TNRC18O15417 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.13■□□□□ 0.81
TNRC18O15417 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNRC18O15417 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.13■□□□□ 0.81
TNRC18O15417 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNRC18O15417 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TNRC18O15417 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNRC18O15417 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNRC18O15417 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNRC18O15417 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNRC18O15417 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TNRC18O15417 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNRC18O15417 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNRC18O15417 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNRC18O15417 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
TNRC18O15417 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TNRC18O15417 AC004461.1-201ENST00000412461 403 ntBASIC20.12■□□□□ 0.81
TNRC18O15417 HCG4B-203ENST00000450128 991 ntBASIC20.12■□□□□ 0.81
TNRC18O15417 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TNRC18O15417 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.12■□□□□ 0.81
TNRC18O15417 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNRC18O15417 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNRC18O15417 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNRC18O15417 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNRC18O15417 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.12■□□□□ 0.81
TNRC18O15417 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TNRC18O15417 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNRC18O15417 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TNRC18O15417 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNRC18O15417 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.12■□□□□ 0.81
TNRC18O15417 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.12■□□□□ 0.81
TNRC18O15417 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TNRC18O15417 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.12■□□□□ 0.81
TNRC18O15417 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNRC18O15417 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.12■□□□□ 0.81
TNRC18O15417 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNRC18O15417 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNRC18O15417 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNRC18O15417 AC004817.3-201ENST00000602957 2129 ntBASIC20.11■□□□□ 0.81
TNRC18O15417 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TNRC18O15417 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNRC18O15417 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TNRC18O15417 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TNRC18O15417 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TNRC18O15417 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TNRC18O15417 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TNRC18O15417 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TNRC18O15417 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNRC18O15417 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNRC18O15417 U91328.1-201ENST00000437528 223 ntBASIC20.1■□□□□ 0.81
TNRC18O15417 RPS2P32-201ENST00000439199 892 ntBASIC20.1■□□□□ 0.81
TNRC18O15417 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TNRC18O15417 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.1■□□□□ 0.81
TNRC18O15417 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.1■□□□□ 0.81
TNRC18O15417 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.1■□□□□ 0.81
TNRC18O15417 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TNRC18O15417 AC051619.7-201ENST00000568314 623 ntBASIC20.1■□□□□ 0.81
TNRC18O15417 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.1■□□□□ 0.81
TNRC18O15417 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.1■□□□□ 0.81
TNRC18O15417 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNRC18O15417 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNRC18O15417 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TNRC18O15417 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.1■□□□□ 0.81
TNRC18O15417 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms