Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SURF4O15260 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SURF4O15260 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
SURF4O15260 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.81■□□□□ 0.28
SURF4O15260 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SURF4O15260 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SURF4O15260 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SURF4O15260 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SURF4O15260 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.8■□□□□ 0.28
SURF4O15260 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.8■□□□□ 0.28
SURF4O15260 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.8■□□□□ 0.28
SURF4O15260 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.8■□□□□ 0.28
SURF4O15260 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SURF4O15260 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SURF4O15260 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.8■□□□□ 0.28
SURF4O15260 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 KRT16P5-201ENST00000455284 522 ntBASIC16.8■□□□□ 0.28
SURF4O15260 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.8■□□□□ 0.28
SURF4O15260 AL445675.2-201ENST00000620291 557 ntBASIC16.8■□□□□ 0.28
SURF4O15260 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.8■□□□□ 0.28
SURF4O15260 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.8■□□□□ 0.28
SURF4O15260 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SURF4O15260 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.8■□□□□ 0.28
SURF4O15260 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.8■□□□□ 0.28
SURF4O15260 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.8■□□□□ 0.28
SURF4O15260 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.8■□□□□ 0.28
SURF4O15260 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SURF4O15260 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SURF4O15260 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SURF4O15260 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SURF4O15260 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SURF4O15260 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SURF4O15260 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SURF4O15260 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SURF4O15260 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SURF4O15260 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SURF4O15260 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SURF4O15260 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.79■□□□□ 0.28
SURF4O15260 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SURF4O15260 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SURF4O15260 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SURF4O15260 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.79■□□□□ 0.28
SURF4O15260 RN7SL471P-201ENST00000580476 299 ntBASIC16.79■□□□□ 0.28
SURF4O15260 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.79■□□□□ 0.28
SURF4O15260 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SURF4O15260 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.79■□□□□ 0.28
SURF4O15260 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.79■□□□□ 0.28
SURF4O15260 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SURF4O15260 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SURF4O15260 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.79■□□□□ 0.28
SURF4O15260 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SURF4O15260 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SURF4O15260 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SURF4O15260 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SURF4O15260 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SURF4O15260 AC008556.1-201ENST00000610908 2040 ntBASIC16.79■□□□□ 0.28
SURF4O15260 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SURF4O15260 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SURF4O15260 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SURF4O15260 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SURF4O15260 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.78■□□□□ 0.28
SURF4O15260 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SURF4O15260 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.78■□□□□ 0.28
SURF4O15260 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SURF4O15260 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SURF4O15260 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SURF4O15260 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SURF4O15260 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SURF4O15260 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SURF4O15260 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SURF4O15260 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SURF4O15260 AC239809.2-201ENST00000415381 517 ntBASIC16.78■□□□□ 0.28
SURF4O15260 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SURF4O15260 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.78■□□□□ 0.28
SURF4O15260 AC131212.4-201ENST00000623606 975 ntBASIC16.78■□□□□ 0.28
SURF4O15260 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SURF4O15260 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SURF4O15260 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SURF4O15260 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SURF4O15260 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SURF4O15260 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SURF4O15260 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SURF4O15260 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms