Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 POM121L13P-201ENST00000422362 380 ntBASIC18.61■□□□□ 0.57
COPEO14579 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.61■□□□□ 0.57
COPEO14579 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.61■□□□□ 0.57
COPEO14579 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COPEO14579 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.61■□□□□ 0.57
COPEO14579 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPEO14579 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COPEO14579 AC134043.2-201ENST00000624206 2238 ntBASIC18.61■□□□□ 0.57
COPEO14579 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPEO14579 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.6■□□□□ 0.57
COPEO14579 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.6■□□□□ 0.57
COPEO14579 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.6■□□□□ 0.57
COPEO14579 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
COPEO14579 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.6■□□□□ 0.57
COPEO14579 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.6■□□□□ 0.57
COPEO14579 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
COPEO14579 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.6■□□□□ 0.57
COPEO14579 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
COPEO14579 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
COPEO14579 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
COPEO14579 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
COPEO14579 POU5F1P3-201ENST00000428824 1078 ntBASIC18.6■□□□□ 0.57
COPEO14579 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
COPEO14579 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.6■□□□□ 0.57
COPEO14579 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.6■□□□□ 0.57
COPEO14579 AL138781.1-201ENST00000566567 1274 ntBASIC18.6■□□□□ 0.57
COPEO14579 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.6■□□□□ 0.57
COPEO14579 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.6■□□□□ 0.57
COPEO14579 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.6■□□□□ 0.57
COPEO14579 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
COPEO14579 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
COPEO14579 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
COPEO14579 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
COPEO14579 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.6■□□□□ 0.57
COPEO14579 AC093677.2-201ENST00000600169 1863 ntBASIC18.6■□□□□ 0.57
COPEO14579 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 AL357033.4-201ENST00000617703 1807 ntBASIC18.6■□□□□ 0.57
COPEO14579 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPEO14579 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.59■□□□□ 0.57
COPEO14579 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.59■□□□□ 0.57
COPEO14579 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COPEO14579 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 KRT8P45-201ENST00000414328 1447 ntBASIC18.59■□□□□ 0.57
COPEO14579 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.59■□□□□ 0.57
COPEO14579 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.59■□□□□ 0.57
COPEO14579 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.59■□□□□ 0.57
COPEO14579 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.59■□□□□ 0.57
COPEO14579 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.59■□□□□ 0.57
COPEO14579 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.59■□□□□ 0.57
COPEO14579 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.59■□□□□ 0.57
COPEO14579 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.59■□□□□ 0.57
COPEO14579 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
COPEO14579 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COPEO14579 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COPEO14579 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.59■□□□□ 0.57
COPEO14579 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.59■□□□□ 0.57
COPEO14579 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
COPEO14579 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.59■□□□□ 0.57
COPEO14579 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPEO14579 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.59■□□□□ 0.57
COPEO14579 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms