Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN3O00409 KRT8P9-201ENST00000558927 1449 ntBASIC19.91■□□□□ 0.78
FOXN3O00409 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN3O00409 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN3O00409 AC034236.2-201ENST00000606662 1610 ntBASIC19.91■□□□□ 0.78
FOXN3O00409 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
FOXN3O00409 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN3O00409 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN3O00409 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXN3O00409 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN3O00409 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXN3O00409 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN3O00409 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.9■□□□□ 0.78
FOXN3O00409 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXN3O00409 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXN3O00409 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXN3O00409 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXN3O00409 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.9■□□□□ 0.78
FOXN3O00409 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXN3O00409 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN3O00409 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.9■□□□□ 0.78
FOXN3O00409 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN3O00409 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
FOXN3O00409 CYP2D8P-201ENST00000433633 1490 ntBASIC19.9■□□□□ 0.78
FOXN3O00409 AC036111.1-201ENST00000533973 1582 ntBASIC19.9■□□□□ 0.78
FOXN3O00409 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.9■□□□□ 0.78
FOXN3O00409 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
FOXN3O00409 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN3O00409 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN3O00409 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN3O00409 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN3O00409 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN3O00409 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN3O00409 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN3O00409 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN3O00409 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
FOXN3O00409 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.89■□□□□ 0.78
FOXN3O00409 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
FOXN3O00409 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.89■□□□□ 0.78
FOXN3O00409 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
FOXN3O00409 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.89■□□□□ 0.78
FOXN3O00409 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN3O00409 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN3O00409 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN3O00409 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN3O00409 AC135776.1-201ENST00000319817 2481 ntBASIC19.89■□□□□ 0.77
FOXN3O00409 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN3O00409 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN3O00409 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN3O00409 INGX-201ENST00000359239 846 ntBASIC19.89■□□□□ 0.77
FOXN3O00409 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
FOXN3O00409 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN3O00409 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN3O00409 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.89■□□□□ 0.77
FOXN3O00409 AC007663.1-201ENST00000438948 1240 ntBASIC19.89■□□□□ 0.77
FOXN3O00409 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.89■□□□□ 0.77
FOXN3O00409 KRT8P50-201ENST00000562022 1438 ntBASIC19.89■□□□□ 0.77
FOXN3O00409 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.89■□□□□ 0.77
FOXN3O00409 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.89■□□□□ 0.77
FOXN3O00409 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN3O00409 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
FOXN3O00409 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN3O00409 AC099343.3-201ENST00000605834 2503 ntBASIC19.89■□□□□ 0.77
FOXN3O00409 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN3O00409 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN3O00409 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXN3O00409 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN3O00409 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN3O00409 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN3O00409 ABALON-201ENST00000629058 1903 ntBASIC19.88■□□□□ 0.77
FOXN3O00409 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN3O00409 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
FOXN3O00409 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN3O00409 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
FOXN3O00409 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXN3O00409 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN3O00409 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.88■□□□□ 0.77
FOXN3O00409 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.88■□□□□ 0.77
FOXN3O00409 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.88■□□□□ 0.77
FOXN3O00409 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN3O00409 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXN3O00409 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN3O00409 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN3O00409 AC018470.1-201ENST00000624790 3129 ntBASIC19.88■□□□□ 0.77
FOXN3O00409 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN3O00409 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
FOXN3O00409 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN3O00409 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
FOXN3O00409 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN3O00409 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
FOXN3O00409 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.87■□□□□ 0.77
FOXN3O00409 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
FOXN3O00409 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN3O00409 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
FOXN3O00409 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms