Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.91■□□□□ 0.94
DDX39AO00148 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
DDX39AO00148 AC079602.3-201ENST00000623931 403 ntBASIC20.91■□□□□ 0.94
DDX39AO00148 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
DDX39AO00148 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX39AO00148 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX39AO00148 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX39AO00148 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
DDX39AO00148 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DDX39AO00148 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.9■□□□□ 0.94
DDX39AO00148 AC005332.1-201ENST00000577698 1310 ntBASIC20.9■□□□□ 0.94
DDX39AO00148 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX39AO00148 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DDX39AO00148 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.9■□□□□ 0.94
DDX39AO00148 HBZP1-201ENST00000354915 429 ntBASIC20.9■□□□□ 0.94
DDX39AO00148 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX39AO00148 SPDYE13P-201ENST00000445314 798 ntBASIC20.9■□□□□ 0.94
DDX39AO00148 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.9■□□□□ 0.94
DDX39AO00148 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX39AO00148 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.9■□□□□ 0.94
DDX39AO00148 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
DDX39AO00148 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX39AO00148 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DDX39AO00148 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX39AO00148 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.9■□□□□ 0.94
DDX39AO00148 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.9■□□□□ 0.94
DDX39AO00148 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
DDX39AO00148 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX39AO00148 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
DDX39AO00148 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
DDX39AO00148 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX39AO00148 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
DDX39AO00148 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX39AO00148 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX39AO00148 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX39AO00148 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.89■□□□□ 0.93
DDX39AO00148 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX39AO00148 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX39AO00148 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX39AO00148 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX39AO00148 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.89■□□□□ 0.93
DDX39AO00148 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.89■□□□□ 0.93
DDX39AO00148 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX39AO00148 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.89■□□□□ 0.93
DDX39AO00148 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
DDX39AO00148 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
DDX39AO00148 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
DDX39AO00148 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX39AO00148 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
DDX39AO00148 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.88■□□□□ 0.93
DDX39AO00148 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
DDX39AO00148 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX39AO00148 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX39AO00148 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX39AO00148 IER3-202ENST00000376377 1350 ntBASIC20.88■□□□□ 0.93
DDX39AO00148 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX39AO00148 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX39AO00148 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX39AO00148 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX39AO00148 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.88■□□□□ 0.93
DDX39AO00148 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.88■□□□□ 0.93
DDX39AO00148 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.88■□□□□ 0.93
DDX39AO00148 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX39AO00148 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.88■□□□□ 0.93
DDX39AO00148 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.88■□□□□ 0.93
DDX39AO00148 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
DDX39AO00148 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.88■□□□□ 0.93
DDX39AO00148 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX39AO00148 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX39AO00148 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX39AO00148 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX39AO00148 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.88■□□□□ 0.93
DDX39AO00148 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.88■□□□□ 0.93
DDX39AO00148 AL499627.1-201ENST00000569373 2188 ntBASIC20.87■□□□□ 0.93
DDX39AO00148 KRT8P7-201ENST00000533003 1432 ntBASIC20.87■□□□□ 0.93
DDX39AO00148 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
DDX39AO00148 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
DDX39AO00148 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX39AO00148 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.87■□□□□ 0.93
DDX39AO00148 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX39AO00148 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX39AO00148 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX39AO00148 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX39AO00148 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX39AO00148 UPK3BP1-201ENST00000428678 509 ntBASIC20.87■□□□□ 0.93
DDX39AO00148 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.87■□□□□ 0.93
DDX39AO00148 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX39AO00148 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX39AO00148 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.87■□□□□ 0.93
DDX39AO00148 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.87■□□□□ 0.93
DDX39AO00148 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.87■□□□□ 0.93
DDX39AO00148 AC091076.1-201ENST00000610741 619 ntBASIC20.87■□□□□ 0.93
DDX39AO00148 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX39AO00148 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX39AO00148 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX39AO00148 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
DDX39AO00148 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX39AO00148 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX39AO00148 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX39AO00148 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms