Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 PRSS44-201ENST00000515154 1146 ntBASIC16.95■□□□□ 0.3
CENPBD1B2RD01 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 AF186192.3-201ENST00000583427 947 ntBASIC16.95■□□□□ 0.3
CENPBD1B2RD01 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 AL031985.4-201ENST00000642138 673 ntBASIC16.95■□□□□ 0.3
CENPBD1B2RD01 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CENPBD1B2RD01 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.94■□□□□ 0.3
CENPBD1B2RD01 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.93■□□□□ 0.3
CENPBD1B2RD01 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 AC142381.4-202ENST00000563973 229 ntBASIC16.93■□□□□ 0.3
CENPBD1B2RD01 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 AP001412.1-201ENST00000608405 714 ntBASIC16.93■□□□□ 0.3
CENPBD1B2RD01 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CENPBD1B2RD01 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPBD1B2RD01 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.92■□□□□ 0.3
CENPBD1B2RD01 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CENPBD1B2RD01 AL031598.1-201ENST00000561511 1773 ntBASIC16.92■□□□□ 0.3
CENPBD1B2RD01 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPBD1B2RD01 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.92■□□□□ 0.3
CENPBD1B2RD01 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPBD1B2RD01 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPBD1B2RD01 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPBD1B2RD01 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPBD1B2RD01 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPBD1B2RD01 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.92■□□□□ 0.3
CENPBD1B2RD01 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPBD1B2RD01 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPBD1B2RD01 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CENPBD1B2RD01 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms