Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
MBD3L5A6NJ08 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L5A6NJ08 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L5A6NJ08 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L5A6NJ08 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.31■□□□□ 0.2
MBD3L5A6NJ08 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L5A6NJ08 LINC00265-3P-201ENST00000447588 903 ntBASIC16.31■□□□□ 0.2
MBD3L5A6NJ08 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L5A6NJ08 IGHV3-41-201ENST00000613121 348 ntBASIC16.31■□□□□ 0.2
MBD3L5A6NJ08 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.31■□□□□ 0.2
MBD3L5A6NJ08 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.31■□□□□ 0.2
MBD3L5A6NJ08 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.31■□□□□ 0.2
MBD3L5A6NJ08 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.31■□□□□ 0.2
MBD3L5A6NJ08 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L5A6NJ08 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
MBD3L5A6NJ08 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L5A6NJ08 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L5A6NJ08 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 AC112777.1-201ENST00000540175 1423 ntBASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 TOB2P1-201ENST00000469761 992 ntBASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 AC012615.1-201ENST00000565797 1299 ntBASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 AC008687.5-201ENST00000593746 558 ntBASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 AIRN-201ENST00000601203 4374 ntBASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.3■□□□□ 0.2
MBD3L5A6NJ08 AC009102.3-201ENST00000623118 1491 ntBASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 AC116562.4-201ENST00000641316 2276 ntBASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 GUSBP12-201ENST00000513727 720 ntBASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 AP000867.3-201ENST00000524675 377 ntBASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L5A6NJ08 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 AL353692.3-201ENST00000407031 1396 ntBASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 AC111152.3-201ENST00000569699 673 ntBASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 AL592071.1-201ENST00000611956 408 ntBASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MBD3L5A6NJ08 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms