Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TBC1D3FA6NER0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 PVRIG2P-201ENST00000435460 978 ntBASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 MIR3180-4-201ENST00000582223 153 ntBASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 AL357033.4-201ENST00000617703 1807 ntBASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TBC1D3FA6NER0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 CHCHD2P8-201ENST00000429873 447 ntBASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 PRELID1P1-202ENST00000567272 903 ntBASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 RNF126P1-202ENST00000569893 925 ntBASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 HEIH-201ENST00000623091 1652 ntBASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 Z98044.1-201ENST00000632503 1764 ntBASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 KRT18P1-202ENST00000452408 1331 ntBASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TBC1D3FA6NER0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 AP002383.4-201ENST00000442518 975 ntBASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 AP003733.1-201ENST00000491725 852 ntBASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 AP002414.4-201ENST00000589764 1148 ntBASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3FA6NER0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms