Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 MIR564-202ENST00000385049 94 ntBASIC17.11■□□□□ 0.33
CDHR4A6H8M9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 AL162741.1-201ENST00000565563 1558 ntBASIC17.11■□□□□ 0.33
CDHR4A6H8M9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDHR4A6H8M9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 MIR4785-201ENST00000585005 73 ntBASIC17.1■□□□□ 0.33
CDHR4A6H8M9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.1■□□□□ 0.33
CDHR4A6H8M9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 UNC93B2-201ENST00000285383 730 ntBASIC17.09■□□□□ 0.33
CDHR4A6H8M9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 TSPY7P-201ENST00000431358 1114 ntBASIC17.09■□□□□ 0.33
CDHR4A6H8M9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 RBM17P1-201ENST00000453646 1190 ntBASIC17.09■□□□□ 0.33
CDHR4A6H8M9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 MYLKP1-201ENST00000509077 1580 ntBASIC17.09■□□□□ 0.33
CDHR4A6H8M9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDHR4A6H8M9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CDHR4A6H8M9 HCG11-201ENST00000411553 5696 ntBASIC17.08■□□□□ 0.33
CDHR4A6H8M9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDHR4A6H8M9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDHR4A6H8M9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDHR4A6H8M9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDHR4A6H8M9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDHR4A6H8M9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDHR4A6H8M9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDHR4A6H8M9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDHR4A6H8M9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.08■□□□□ 0.32
CDHR4A6H8M9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDHR4A6H8M9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDHR4A6H8M9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDHR4A6H8M9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.08■□□□□ 0.32
CDHR4A6H8M9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms