Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.49■□□□□ 0.55
TBC1D3DA0A087WVF3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3DA0A087WVF3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TBC1D3DA0A087WVF3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3DA0A087WVF3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3DA0A087WVF3 HEIH-201ENST00000623091 1652 ntBASIC18.49■□□□□ 0.55
TBC1D3DA0A087WVF3 Z98044.1-201ENST00000632503 1764 ntBASIC18.49■□□□□ 0.55
TBC1D3DA0A087WVF3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3DA0A087WVF3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.49■□□□□ 0.55
TBC1D3DA0A087WVF3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.49■□□□□ 0.55
TBC1D3DA0A087WVF3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3DA0A087WVF3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.49■□□□□ 0.55
TBC1D3DA0A087WVF3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3DA0A087WVF3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TBC1D3DA0A087WVF3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.49■□□□□ 0.55
TBC1D3DA0A087WVF3 KRT18P1-202ENST00000452408 1331 ntBASIC18.49■□□□□ 0.55
TBC1D3DA0A087WVF3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TBC1D3DA0A087WVF3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 AP002383.4-201ENST00000442518 975 ntBASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 AP003733.1-201ENST00000491725 852 ntBASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 AP002414.4-201ENST00000589764 1148 ntBASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TBC1D3DA0A087WVF3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 AC009065.1-201ENST00000564055 1225 ntBASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 MIR3180-1-201ENST00000580374 94 ntBASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 MIR3180-3-201ENST00000584616 94 ntBASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 Z83836.1-201ENST00000624605 1642 ntBASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.47■□□□□ 0.55
TBC1D3DA0A087WVF3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 TPM4P1-201ENST00000436100 807 ntBASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 AC005332.3-201ENST00000589904 676 ntBASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 AL691432.3-201ENST00000621860 400 ntBASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3DA0A087WVF3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms