Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 FAM197Y1-201ENST00000421178 764 ntBASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 FAM201B-201ENST00000458407 597 ntBASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV27A0A087WT01 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 TSPY20P-201ENST00000450910 630 ntBASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 MYC-208ENST00000641036 567 ntBASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 KRT8P45-201ENST00000414328 1447 ntBASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 AC112777.1-201ENST00000540175 1423 ntBASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV27A0A087WT01 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 LETM1P2-201ENST00000597330 2178 ntBASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 KRT18P29-201ENST00000397031 1267 ntBASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 MESTP1-201ENST00000404287 994 ntBASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 ITM2C-210ENST00000620962 501 ntBASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 AL162741.1-201ENST00000565563 1558 ntBASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 AC135776.1-201ENST00000319817 2481 ntBASIC16.85■□□□□ 0.29
TRAV27A0A087WT01 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms