Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 pRNA.6-201ENST00000610482 90 ntBASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 pRNA.5-201ENST00000612139 90 ntBASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 pRNA.11-201ENST00000618423 90 ntBASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 pRNA.13-201ENST00000619112 90 ntBASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRBV20-1A0A075B6N2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC12.41□□□□□ -0.42
TRBV20-1A0A075B6N2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC12.4□□□□□ -0.42
TRBV20-1A0A075B6N2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms