Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
GPC6Q9Y625 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.61■□□□□ 0.41
GPC6Q9Y625 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
GPC6Q9Y625 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.61■□□□□ 0.41
GPC6Q9Y625 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.61■□□□□ 0.41
GPC6Q9Y625 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.61■□□□□ 0.41
GPC6Q9Y625 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.61■□□□□ 0.41
GPC6Q9Y625 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.61■□□□□ 0.41
GPC6Q9Y625 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 HTR7P1-201ENST00000538670 1336 ntBASIC17.61■□□□□ 0.41
GPC6Q9Y625 AL135905.2-201ENST00000584934 1404 ntBASIC17.61■□□□□ 0.41
GPC6Q9Y625 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.61■□□□□ 0.41
GPC6Q9Y625 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
GPC6Q9Y625 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC6Q9Y625 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.61■□□□□ 0.41
GPC6Q9Y625 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
GPC6Q9Y625 BCL2-203ENST00000589955 5011 ntBASIC17.6■□□□□ 0.41
GPC6Q9Y625 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
GPC6Q9Y625 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.6■□□□□ 0.41
GPC6Q9Y625 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.6■□□□□ 0.41
GPC6Q9Y625 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
GPC6Q9Y625 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.6■□□□□ 0.41
GPC6Q9Y625 AL353708.3-201ENST00000610272 989 ntBASIC17.6■□□□□ 0.41
GPC6Q9Y625 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.6■□□□□ 0.41
GPC6Q9Y625 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.6■□□□□ 0.41
GPC6Q9Y625 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
GPC6Q9Y625 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
GPC6Q9Y625 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.6■□□□□ 0.41
GPC6Q9Y625 AC141586.5-201ENST00000624546 2050 ntBASIC17.6■□□□□ 0.41
GPC6Q9Y625 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
GPC6Q9Y625 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.6■□□□□ 0.41
GPC6Q9Y625 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
GPC6Q9Y625 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
GPC6Q9Y625 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
GPC6Q9Y625 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC6Q9Y625 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC6Q9Y625 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.59■□□□□ 0.41
GPC6Q9Y625 NOC2LP2-201ENST00000407594 1944 ntBASIC17.59■□□□□ 0.41
GPC6Q9Y625 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC6Q9Y625 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.59■□□□□ 0.41
GPC6Q9Y625 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.59■□□□□ 0.41
GPC6Q9Y625 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.59■□□□□ 0.41
GPC6Q9Y625 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC6Q9Y625 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GPC6Q9Y625 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.59■□□□□ 0.41
GPC6Q9Y625 AP002982.1-201ENST00000492365 877 ntBASIC17.59■□□□□ 0.41
GPC6Q9Y625 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GPC6Q9Y625 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.59■□□□□ 0.41
GPC6Q9Y625 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.59■□□□□ 0.41
GPC6Q9Y625 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.59■□□□□ 0.41
GPC6Q9Y625 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
GPC6Q9Y625 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC6Q9Y625 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC6Q9Y625 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
GPC6Q9Y625 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms