Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.36■□□□□ 0.85
PCDHB2Q9Y5E7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHB2Q9Y5E7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHB2Q9Y5E7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
PCDHB2Q9Y5E7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHB2Q9Y5E7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB2Q9Y5E7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB2Q9Y5E7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHB2Q9Y5E7 KRT8P32-201ENST00000512863 1461 ntBASIC20.36■□□□□ 0.85
PCDHB2Q9Y5E7 AIRN-201ENST00000601203 4374 ntBASIC20.36■□□□□ 0.85
PCDHB2Q9Y5E7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PCDHB2Q9Y5E7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 AC069148.1-201ENST00000608741 768 ntBASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB2Q9Y5E7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 AC004408.2-201ENST00000623613 2777 ntBASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 KRT18P56-201ENST00000507275 550 ntBASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 AL157888.1-201ENST00000631930 593 ntBASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB2Q9Y5E7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 AC093503.3-201ENST00000624917 2352 ntBASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 KRT18P23-201ENST00000435622 1283 ntBASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB2Q9Y5E7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
PCDHB2Q9Y5E7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDHB2Q9Y5E7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PCDHB2Q9Y5E7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDHB2Q9Y5E7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDHB2Q9Y5E7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHB2Q9Y5E7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHB2Q9Y5E7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
PCDHB2Q9Y5E7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms