Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 NFYC-AS1-201ENST00000606277 1687 ntBASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 MTMR9LP-203ENST00000426597 1545 ntBASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 AC069148.1-201ENST00000608741 768 ntBASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 AC083906.6-201ENST00000641366 219 ntBASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 HLA-F-220ENST00000434407 884 ntBASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC00588Q9Y4M8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LINC00588Q9Y4M8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms