Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFT52Q9Y366 HEIH-201ENST00000623091 1652 ntBASIC17.44■□□□□ 0.38
IFT52Q9Y366 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFT52Q9Y366 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.44■□□□□ 0.38
IFT52Q9Y366 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFT52Q9Y366 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFT52Q9Y366 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
IFT52Q9Y366 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.44■□□□□ 0.38
IFT52Q9Y366 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.44■□□□□ 0.38
IFT52Q9Y366 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFT52Q9Y366 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFT52Q9Y366 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IFT52Q9Y366 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT52Q9Y366 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT52Q9Y366 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IFT52Q9Y366 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT52Q9Y366 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IFT52Q9Y366 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 AC091390.4-202ENST00000476426 537 ntBASIC17.43■□□□□ 0.38
IFT52Q9Y366 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 KRT8P3-201ENST00000519669 1449 ntBASIC17.43■□□□□ 0.38
IFT52Q9Y366 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT52Q9Y366 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IFT52Q9Y366 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IFT52Q9Y366 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT52Q9Y366 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT52Q9Y366 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT52Q9Y366 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT52Q9Y366 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.43■□□□□ 0.38
IFT52Q9Y366 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
IFT52Q9Y366 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 AC073195.1-201ENST00000607241 877 ntBASIC17.42■□□□□ 0.38
IFT52Q9Y366 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 CR392000.1-201ENST00000624770 1228 ntBASIC17.42■□□□□ 0.38
IFT52Q9Y366 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
IFT52Q9Y366 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IFT52Q9Y366 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IFT52Q9Y366 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFT52Q9Y366 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
IFT52Q9Y366 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFT52Q9Y366 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.41■□□□□ 0.38
IFT52Q9Y366 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFT52Q9Y366 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IFT52Q9Y366 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
IFT52Q9Y366 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IFT52Q9Y366 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IFT52Q9Y366 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms