Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 MCCD1P1-208ENST00000445732 328 ntBASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 NTF6B-201ENST00000591913 560 ntBASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RPH3AQ9Y2J0 AC073508.3-201ENST00000619697 1419 ntBASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 TNXA-203ENST00000507684 2038 ntBASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPH3AQ9Y2J0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 AC036111.1-201ENST00000533973 1582 ntBASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 BCL2-203ENST00000589955 5011 ntBASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms