Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 AL353692.3-201ENST00000407031 1396 ntBASIC24.29■■□□□ 1.48
SPG7Q9UQ90 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 DFFB-203ENST00000341385 572 ntTSL 5 BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SPG7Q9UQ90 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC24.28■■□□□ 1.48
SPG7Q9UQ90 KRT8P50-201ENST00000562022 1438 ntBASIC24.28■■□□□ 1.48
SPG7Q9UQ90 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SPG7Q9UQ90 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SPG7Q9UQ90 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SPG7Q9UQ90 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SPG7Q9UQ90 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC24.28■■□□□ 1.48
SPG7Q9UQ90 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SPG7Q9UQ90 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC24.28■■□□□ 1.48
SPG7Q9UQ90 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC24.28■■□□□ 1.48
SPG7Q9UQ90 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC24.28■■□□□ 1.48
SPG7Q9UQ90 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
SPG7Q9UQ90 VENTXP7-201ENST00000475503 772 ntBASIC24.28■■□□□ 1.48
SPG7Q9UQ90 AL353801.3-201ENST00000609898 542 ntBASIC24.28■■□□□ 1.48
SPG7Q9UQ90 GXYLT1P4-201ENST00000613576 1192 ntBASIC24.28■■□□□ 1.48
SPG7Q9UQ90 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC24.28■■□□□ 1.48
SPG7Q9UQ90 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC24.28■■□□□ 1.48
SPG7Q9UQ90 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
SPG7Q9UQ90 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC24.28■■□□□ 1.48
SPG7Q9UQ90 AL357033.4-201ENST00000617703 1807 ntBASIC24.28■■□□□ 1.48
SPG7Q9UQ90 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SPG7Q9UQ90 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
SPG7Q9UQ90 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 AP002469.2-201ENST00000531724 424 ntBASIC24.27■■□□□ 1.48
SPG7Q9UQ90 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 HEIH-201ENST00000623091 1652 ntBASIC24.27■■□□□ 1.48
SPG7Q9UQ90 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SPG7Q9UQ90 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 AL158211.5-201ENST00000623583 2518 ntBASIC24.26■■□□□ 1.47
SPG7Q9UQ90 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 KRT16P4-201ENST00000453883 522 ntBASIC24.26■■□□□ 1.47
SPG7Q9UQ90 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 BET1L-206ENST00000486280 665 ntTSL 3 BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 FICD-205ENST00000552758 603 ntTSL 2 BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 AL121912.1-201ENST00000603683 238 ntBASIC24.26■■□□□ 1.47
SPG7Q9UQ90 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SPG7Q9UQ90 NSUN5P1-202ENST00000421140 1535 ntBASIC24.25■■□□□ 1.47
SPG7Q9UQ90 NSUN5P2-203ENST00000457352 1529 ntBASIC24.25■■□□□ 1.47
SPG7Q9UQ90 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SPG7Q9UQ90 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SPG7Q9UQ90 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC24.25■■□□□ 1.47
SPG7Q9UQ90 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms