Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 BX640515.1-201ENST00000617215 977 ntBASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC28.72■■■□□ 2.19
CDK11AQ9UQ88 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 NUS1P2-201ENST00000417358 873 ntBASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 GPALPP1-207ENST00000611650 899 ntBASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
CDK11AQ9UQ88 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CDK11AQ9UQ88 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CDK11AQ9UQ88 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CDK11AQ9UQ88 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC28.7■■■□□ 2.19
CDK11AQ9UQ88 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.19
CDK11AQ9UQ88 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.18
CDK11AQ9UQ88 AP000593.1-201ENST00000393668 712 ntBASIC28.7■■■□□ 2.18
CDK11AQ9UQ88 MINOS1P3-201ENST00000457048 203 ntBASIC28.7■■■□□ 2.18
CDK11AQ9UQ88 AF238378.1-201ENST00000526806 358 ntBASIC28.7■■■□□ 2.18
CDK11AQ9UQ88 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CDK11AQ9UQ88 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CDK11AQ9UQ88 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CDK11AQ9UQ88 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CDK11AQ9UQ88 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CDK11AQ9UQ88 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC28.69■■■□□ 2.18
CDK11AQ9UQ88 TEX30-205ENST00000376029 959 ntTSL 2 BASIC28.69■■■□□ 2.18
CDK11AQ9UQ88 TSPY12P-201ENST00000421279 868 ntBASIC28.69■■■□□ 2.18
CDK11AQ9UQ88 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC28.69■■■□□ 2.18
CDK11AQ9UQ88 AC006538.3-201ENST00000612495 578 ntBASIC28.69■■■□□ 2.18
CDK11AQ9UQ88 HEIH-201ENST00000623091 1652 ntBASIC28.69■■■□□ 2.18
CDK11AQ9UQ88 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CDK11AQ9UQ88 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CDK11AQ9UQ88 AL357033.4-201ENST00000617703 1807 ntBASIC28.69■■■□□ 2.18
CDK11AQ9UQ88 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CDK11AQ9UQ88 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CDK11AQ9UQ88 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
CDK11AQ9UQ88 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CDK11AQ9UQ88 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC28.68■■■□□ 2.18
CDK11AQ9UQ88 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
CDK11AQ9UQ88 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CDK11AQ9UQ88 DDT-203ENST00000403754 569 ntTSL 3 BASIC28.68■■■□□ 2.18
CDK11AQ9UQ88 DDT-206ENST00000430101 573 ntTSL 2 BASIC28.68■■■□□ 2.18
CDK11AQ9UQ88 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
CDK11AQ9UQ88 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CDK11AQ9UQ88 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC28.68■■■□□ 2.18
CDK11AQ9UQ88 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CDK11AQ9UQ88 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
CDK11AQ9UQ88 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC28.68■■■□□ 2.18
CDK11AQ9UQ88 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CDK11AQ9UQ88 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 EMD-201ENST00000369835 966 ntTSL 3 BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC28.67■■■□□ 2.18
CDK11AQ9UQ88 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 AL163051.1-201ENST00000569214 1512 ntBASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms