Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 KRT8P7-201ENST00000533003 1432 ntBASIC17.51■□□□□ 0.39
CTSFQ9UBX1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 AC116407.4-201ENST00000623319 1061 ntBASIC17.51■□□□□ 0.39
CTSFQ9UBX1 AC079602.3-201ENST00000623931 403 ntBASIC17.51■□□□□ 0.39
CTSFQ9UBX1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 AL357033.4-201ENST00000617703 1807 ntBASIC17.51■□□□□ 0.39
CTSFQ9UBX1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 MTMR9LP-203ENST00000426597 1545 ntBASIC17.51■□□□□ 0.39
CTSFQ9UBX1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.51■□□□□ 0.39
CTSFQ9UBX1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 AC104390.1-201ENST00000555663 520 ntBASIC17.5■□□□□ 0.39
CTSFQ9UBX1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 AC010240.3-201ENST00000607688 395 ntBASIC17.5■□□□□ 0.39
CTSFQ9UBX1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.5■□□□□ 0.39
CTSFQ9UBX1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 Z98044.1-201ENST00000632503 1764 ntBASIC17.5■□□□□ 0.39
CTSFQ9UBX1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTSFQ9UBX1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
CTSFQ9UBX1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSFQ9UBX1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms