Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 KRT16P5-201ENST00000455284 522 ntBASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 AC131212.4-201ENST00000623606 975 ntBASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 LTB4R2-202ENST00000528054 3092 ntBASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CDC42SE2Q9NRR3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CDC42SE2Q9NRR3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC12.83□□□□□ -0.35
CDC42SE2Q9NRR3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC12.83□□□□□ -0.35
CDC42SE2Q9NRR3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 AL445675.2-201ENST00000620291 557 ntBASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDC42SE2Q9NRR3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC42SE2Q9NRR3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms