Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AL031432.5-201ENST00000641059 760 ntBASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
PRDM9Q9NQV7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 AC004408.2-201ENST00000623613 2777 ntBASIC17.57■□□□□ 0.4
PRDM9Q9NQV7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 AC140113.3-201ENST00000605663 199 ntBASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRDM9Q9NQV7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 AC104076.2-201ENST00000448912 469 ntBASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 AC139887.4-201ENST00000607877 719 ntBASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 AC006011.2-201ENST00000621313 1158 ntBASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRDM9Q9NQV7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms