Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 KRT8P26-201ENST00000534154 1276 ntBASIC19.24■□□□□ 0.67
HPS4Q9NQG7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HPS4Q9NQG7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.23■□□□□ 0.67
HPS4Q9NQG7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 PRELID1P1-202ENST00000567272 903 ntBASIC19.23■□□□□ 0.67
HPS4Q9NQG7 AP002414.4-201ENST00000589764 1148 ntBASIC19.23■□□□□ 0.67
HPS4Q9NQG7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.23■□□□□ 0.67
HPS4Q9NQG7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 KRT18P23-201ENST00000435622 1283 ntBASIC19.22■□□□□ 0.67
HPS4Q9NQG7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HPS4Q9NQG7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 RNF126P1-202ENST00000569893 925 ntBASIC19.21■□□□□ 0.67
HPS4Q9NQG7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HPS4Q9NQG7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms