Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 PRELID1P1-202ENST00000567272 903 ntBASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 AC079602.3-201ENST00000623931 403 ntBASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 AC112497.1-201ENST00000624824 639 ntBASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 AL157888.1-201ENST00000631930 593 ntBASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM9SF3Q9HD45 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 Z82202.1-201ENST00000623446 1880 ntBASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM9SF3Q9HD45 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TM9SF3Q9HD45 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TM9SF3Q9HD45 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.58■□□□□ 0.57
TM9SF3Q9HD45 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.58■□□□□ 0.57
TM9SF3Q9HD45 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TM9SF3Q9HD45 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TM9SF3Q9HD45 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
TM9SF3Q9HD45 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TM9SF3Q9HD45 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TM9SF3Q9HD45 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TM9SF3Q9HD45 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.58■□□□□ 0.57
TM9SF3Q9HD45 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TM9SF3Q9HD45 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 MIR3180-1-201ENST00000580374 94 ntBASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 MIR3180-3-201ENST00000584616 94 ntBASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 AL162741.1-201ENST00000565563 1558 ntBASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM9SF3Q9HD45 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF3Q9HD45 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF3Q9HD45 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TM9SF3Q9HD45 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TM9SF3Q9HD45 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.57■□□□□ 0.56
TM9SF3Q9HD45 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF3Q9HD45 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
TM9SF3Q9HD45 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF3Q9HD45 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.57■□□□□ 0.56
TM9SF3Q9HD45 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM9SF3Q9HD45 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
TM9SF3Q9HD45 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.57■□□□□ 0.56
TM9SF3Q9HD45 HLA-F-220ENST00000434407 884 ntBASIC18.57■□□□□ 0.56
TM9SF3Q9HD45 AP002383.4-201ENST00000442518 975 ntBASIC18.57■□□□□ 0.56
TM9SF3Q9HD45 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.57■□□□□ 0.56
TM9SF3Q9HD45 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.57■□□□□ 0.56
TM9SF3Q9HD45 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms