Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.67■□□□□ 0.42
SPTBN4Q9H254 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.67■□□□□ 0.42
SPTBN4Q9H254 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.67■□□□□ 0.42
SPTBN4Q9H254 AL138831.2-201ENST00000606564 490 ntBASIC17.67■□□□□ 0.42
SPTBN4Q9H254 AC064836.3-201ENST00000607928 673 ntBASIC17.67■□□□□ 0.42
SPTBN4Q9H254 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.67■□□□□ 0.42
SPTBN4Q9H254 AC025048.6-201ENST00000634326 1161 ntBASIC17.67■□□□□ 0.42
SPTBN4Q9H254 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPTBN4Q9H254 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPTBN4Q9H254 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SPTBN4Q9H254 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.67■□□□□ 0.42
SPTBN4Q9H254 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SPTBN4Q9H254 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.67■□□□□ 0.42
SPTBN4Q9H254 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPTBN4Q9H254 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.67■□□□□ 0.42
SPTBN4Q9H254 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SPTBN4Q9H254 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPTBN4Q9H254 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.67■□□□□ 0.42
SPTBN4Q9H254 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPTBN4Q9H254 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 AC025678.2-201ENST00000562061 970 ntBASIC17.66■□□□□ 0.42
SPTBN4Q9H254 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.66■□□□□ 0.42
SPTBN4Q9H254 AL358472.5-202ENST00000641448 1267 ntBASIC17.66■□□□□ 0.42
SPTBN4Q9H254 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPTBN4Q9H254 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 TERF1P3-201ENST00000505638 1227 ntBASIC17.65■□□□□ 0.42
SPTBN4Q9H254 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPTBN4Q9H254 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.65■□□□□ 0.42
SPTBN4Q9H254 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SPTBN4Q9H254 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SPTBN4Q9H254 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.64■□□□□ 0.42
SPTBN4Q9H254 GPR89P-201ENST00000407924 1495 ntBASIC17.64■□□□□ 0.41
SPTBN4Q9H254 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 AC010336.2-201ENST00000564226 506 ntBASIC17.64■□□□□ 0.41
SPTBN4Q9H254 AL390955.2-201ENST00000603032 514 ntBASIC17.64■□□□□ 0.41
SPTBN4Q9H254 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 Z98882.1-201ENST00000622160 2253 ntBASIC17.64■□□□□ 0.41
SPTBN4Q9H254 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 AC008761.3-201ENST00000624803 892 ntBASIC17.64■□□□□ 0.41
SPTBN4Q9H254 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTBN4Q9H254 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms