Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FOXP3Q9BZS1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 AC068587.9-201ENST00000641814 219 ntBASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
FOXP3Q9BZS1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 MTMR9LP-203ENST00000426597 1545 ntBASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXP3Q9BZS1 AC008764.6-201ENST00000595909 2069 ntBASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 SLC25A6P5-201ENST00000435663 894 ntBASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 AC112777.1-201ENST00000540175 1423 ntBASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 AL353708.3-201ENST00000610272 989 ntBASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXP3Q9BZS1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 KRT8P41-201ENST00000533985 1514 ntBASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXP3Q9BZS1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms