Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 COX11P1-201ENST00000489116 835 ntBASIC12.96□□□□□ -0.33
UPK3BQ9BT76 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 NEK4P2-201ENST00000580004 1012 ntBASIC12.96□□□□□ -0.33
UPK3BQ9BT76 AC006011.2-201ENST00000621313 1158 ntBASIC12.96□□□□□ -0.33
UPK3BQ9BT76 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UPK3BQ9BT76 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC12.96□□□□□ -0.34
UPK3BQ9BT76 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UPK3BQ9BT76 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
UPK3BQ9BT76 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
UPK3BQ9BT76 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC12.96□□□□□ -0.34
UPK3BQ9BT76 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 WWOX-216ENST00000569818 525 ntBASIC12.95□□□□□ -0.34
UPK3BQ9BT76 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 NEFHP1-201ENST00000412845 2629 ntBASIC12.95□□□□□ -0.34
UPK3BQ9BT76 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK3BQ9BT76 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.94□□□□□ -0.34
UPK3BQ9BT76 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 AK4P3-201ENST00000418260 669 ntBASIC12.94□□□□□ -0.34
UPK3BQ9BT76 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 AC104076.2-201ENST00000448912 469 ntBASIC12.94□□□□□ -0.34
UPK3BQ9BT76 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC12.94□□□□□ -0.34
UPK3BQ9BT76 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms