Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 MTMR9LP-203ENST00000426597 1545 ntBASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 MIR1224-201ENST00000408193 85 ntBASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 AC116562.2-201ENST00000507042 360 ntBASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 REXO1L10P-201ENST00000615707 1290 ntBASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 KRT8P32-201ENST00000512863 1461 ntBASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 AC090164.3-201ENST00000610780 2143 ntBASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.54■□□□□ 0.4
YIPF4Q9BSR8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 MFAP1P1-201ENST00000442257 1255 ntBASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 AC097488.1-201ENST00000507834 756 ntBASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 AC026471.5-201ENST00000615068 467 ntBASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 AC026471.1-201ENST00000564629 3026 ntBASIC17.53■□□□□ 0.4
YIPF4Q9BSR8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 RCC2P3-201ENST00000418112 1537 ntBASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 CRYGFP-201ENST00000418459 633 ntBASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.52■□□□□ 0.4
YIPF4Q9BSR8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
YIPF4Q9BSR8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
YIPF4Q9BSR8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
YIPF4Q9BSR8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
YIPF4Q9BSR8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
YIPF4Q9BSR8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
YIPF4Q9BSR8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.52■□□□□ 0.39
YIPF4Q9BSR8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.52■□□□□ 0.39
YIPF4Q9BSR8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
YIPF4Q9BSR8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
YIPF4Q9BSR8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF4Q9BSR8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF4Q9BSR8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF4Q9BSR8 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.51■□□□□ 0.39
YIPF4Q9BSR8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF4Q9BSR8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF4Q9BSR8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms